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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30230_c3_g9_i2
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		tRNA-splicing_ligase_RtcB_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003972 F RNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008452 F RNA ligase activity
GO:0016874 F ligase activity
GO:0046872 F metal ion binding
GO:0072669 C tRNA-splicing ligase complex
Transcript
Level		FPKM:11.71 TPM:6.52
ORF EntryO_BomoIG1403_complete:A_BomoIG_DN30230_c3_g9_i2
Sequence
(Nucleotide)
GCCGACCAAACTCTTGGTTTTGATAATGCTTACTCCAGTGTCGCTAACTATTTACTGTCA
TGTGGACCTTAGTTTTATCCATTTTCACTGGCAACACTAAAGATAAGCAATCTGATGAAA
GCTATACTTACAGCACCATGGCATGTGGATCCAAACGTTTCTGTCATTCCTTGATGAGTA
CCAGTTAGTACATAACTGCAGGTTCCCATTGTACCACCAATAAGTACAGGCTGACCAGTT
AGTTGATAATCCACAGGTATTAATGGATGATTTGGTGGGAATGCTCTAGTTGAGCCCTTC
CTATGTACTAGTAGAGTTTTCAATTTCCCATCTACTACATGTTCTTCAACCTTGGCAATA
TTATGAGACACATCATATATGACATGCATGTCAAGATCATCAGGTGCCATTTTAAATTGC
TTCGCAAAAGCTTGACGGGTCAAGAATGTCATTGAGCTACGGTTCACCCAAGCAAAATTG
GCAGCAGCAGACATAGCTTTAAGATAATCTTGACCTTCAACAGATTTTATCCTGGCACAT
GCAAGTTGTCTATCATTAGTTTCTATGTTATCTCTCTTCATAGCTTTCTCCATTTGCACT
AAAGCATCAGTTGCTACTTGATGCCCAAAACCACGACTTCCAGAGTGAATCATCACACAA
ACTTGACCAATACTTTCAATACCCATTTTTCCAGCAGCATATTTATCAAATATTTCATCA
ACAACTTGAATCTCTGCATAATGATTTCCAGCTCCTAGTGTGCCCAGTTGAGGTAGACCT
CTTTTCTTTGCTCTGAGACTGACTTTTGATGGATCAGCATTCAACATTCTTCCATATTCT
TCACAGTGTTCCTTATCTTCGGCCCAAACATAACCTTCCCTTAGAGACCAGTCCATACCC
ATTTCTAATGCTTCTTCCAAATCACGTGCATTCATTGGAATAATACCCTTGGAGCCAACT
CCAACAGGTATATGGTCAAACAAGCTCTGAGCTAATTGTTCCTTAATAGGTAGAACATCC
TTCTCATGTAAATTTGTTCTCAATAAACGAACACCACAGTTTATATCGAATCCTACGCCT
CCTGGAGATACTATAGATTTGGGATCATCCATATCAAAAGCTGCCATATTTCCTATAGCG
AACCCATATCCAGAATGAACATCAGGCAATCCCACTGACCGGCCTACAATTCCCGGTAAA
GCTGCAACATTAGCTATCTGTTTTACACCAGGAAGGAATCCACCTGACATACCAGGTCTA
CAACAATTCCTAAGCTCCTCCAACATTAGTTTCTCAAGTGTACTGTTAACGTAAAACACT
CCTTCAACATTCATATTTGGTTGGAAGCCTTTTTTAATTCTCCAACAATATGGATTAATT
TTTTCCAAATATTTAATTTCTTCATTATACTGCCTTACAACCATTATTTTGCACTACTTG
TGTATCGAAAAGGTGTGTTAATGCTATTTAAACCTACTGGATAGGTTTGAAAAACGTAGG
TAAATGGCAATTGAAAACTTAGTTGAAAATTGAAAGAAGCGTTCAGAGAAGTGCACAGAA
CACTATTACTCTCTAATATATTAAGTGTATAATCTATGACTATTACTTCTAGCGAAGTGC
AAGCTCGAATATAATTAGC
(1639 bp)

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