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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30230_c3_g9_i1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		tRNA-splicing_ligase_RtcB_homolog_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003972 F RNA ligase (ATP) activity
GO:0005524 F ATP binding
GO:0006388 P tRNA splicing, via endonucleolytic cleavage and ligation
GO:0006396 P RNA processing
GO:0008033 P tRNA processing
GO:0008452 F RNA ligase activity
GO:0016874 F ligase activity
GO:0022008 P neurogenesis
GO:0046872 F metal ion binding
GO:0072669 C tRNA-splicing ligase complex
GO:2000237 P positive regulation of tRNA processing
Transcript
Level		FPKM:2.68 TPM:1.49
ORF EntryO_BomoIG1397_complete:A_BomoIG_DN30230_c3_g9_i1
Sequence
(Nucleotide)
GGGTAGACGAGCTCAGTCCACCTGGTGTTAAGTGGTTACCGAAGCCCATAGACATCTACA
TCGTAAATACCGCCACCCACCTAGATATATGAGTTCCAAGGTCTGGTGTAGTTAATCGTA
TAGCAATATTTCAGATTAAGGTTTTAACATTTGTATTTGTGATTTTGAAAAACATGAATG
AAATAGAAAAACTGCATGTTTTAAATACAAACAGACGAAATTTTATTATTAGGAATAAAT
TTTTTCATGGTGCTTATTTCAACTGATTTGTTGTTGTACTTTACAAATTCTTCACAAGTT
TTTAGGAAATCCATTACATATTATTATAGTATAATTAGATAATTCAATCAATATATGAAC
TGTCTTAACAGTTTTTAAAAAGAATGATAATTAATAATCACATTAGGAAAGTGAGTTCAT
CCTTTTATAACTGCAATTGGTCTTAATTTAACAGTTTTTTTGCTAATACCAGCAGCATGA
CATGTATCTACGACATCTGTTACATTCTTGTATGACTCTGGTGCCTCTTCCATTACTAGT
TTTGGAGATGCAACTCTAATGGAAATACCCATAGTTTCAAGTTTGTTTAGAACTTCTTTG
TAGTCTATGTTTCTTCTAGACTTGGCTCTAGACAGAGCTCGACCAGCACCATGGCATGTG
GATCCAAACGTTTCTGTCATTCCTTGATGAGTACCAGTTAGTACATAACTGCAGGTTCCC
ATTGTACCACCAATAAGTACAGGCTGACCAGTTAGTTGATAATCCACAGGTATTAATGGA
TGATTTGGTGGGAATGCTCTAGTTGAGCCCTTCCTATGTACTAGTAGAGTTTTCAATTTC
CCATCTACTACATGTTCTTCAACCTTGGCAATATTATGAGACACATCATATATGACATGC
ATGTCAAGATCATCAGGTGCCATTTTAAATTGCTTCGCAAAAGCTTGACGGGTCAAGAAT
GTCATTGAGCTACGGTTCACCCAAGCAAAATTGGCAGCAGCAGACATAGCTTTAAGATAA
TCTTGACCTTCAACAGATTTTATCCTGGCACATGCAAGTTGTCTATCATTAGTTTCTATG
TTATCTCTCTTCATAGCTTTCTCCATTTGCACTAAAGCATCAGTTGCTACTTGATGCCCA
AAACCACGACTTCCAGAGTGAATCATCACACAAACTTGACCAATACTTTCAATACCCATT
TTTCCAGCAGCATATTTATCAAATATTTCATCAACAACTTGAATCTCTGCATAATGATTT
CCAGCTCCTAGTGTGCCCAGTTGAGGTAGACCTCTTTTCTTTGCTCTGAGACTGACTTTT
GATGGATCAGCATTCAACATTCTTCCATATTCTTCACAGTGTTCCTTATCTTCGGCCCAA
ACATAACCTTCCCTTAGAGACCAGTCCATACCCATTTCTAATGCTTCTTCCAAATCACGT
GCATTCATTGGAATAATACCCTTGGAGCCAACTCCAACAGGTATATGGTCAAACAAGCTC
TGAGCTAATTGTTCCTTAATAGGTAGAACATCCTTCTCATGTAAATTTGTTCTCAATAAA
CGAACACCACAGTTTATATCGAATCCTACGCCTCCTGGAGATACTATAGATTTGGGATCA
TCCATATCAAAAGCTGCCATATTTCCTATAGCGAACCCATATCCAGAATGAACATCAGGC
AATCCCACTGACCGGCCTACAATTCCCGGTAAAGCTGCAACATTAGCTATCTGTTTTACA
CCAGGAAGGAATCCACCTGACATACCAGGTCTACAACAATTCCTAAGCTCCTCCAACATT
AGTTTCTCAAGTGTACTGTTAACGTAAAACACTCCTTCAACATTCATATTTGGTTGGAAG
CCTTTTTTAATTCTCCAACAATATGGATTAATTTTTTCCAAATATTTAATTTCTTCATTA
TACTGCCTTACAACCATTATTTTGCACTACTTGTGTATCGAAAAGGTGTGTTAATGCTAT
TTAAACCTACTGGATAGGTTTGAAAAACGTAGGTAAATGGCAATTGAAAACTTAGTTGAA
AATTGAAAGAAGCGTTCAGAGAAGTGCACAGAACACTATTACTCTCTAATATATTAAGTG
TATAATCTATGACTATTACTTCTAGCGAAGTGCAAGCTCGAATATAATTAGC
(2152 bp)

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