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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30225_c6_g2_i8
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		transcription_initiation_factor_TFIID_subunit_4_isoform_X6_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:3.58 TPM:2.00
ORF EntryO_BomoIG1499_complete:A_BomoIG_DN30225_c6_g2_i8
Sequence
(Nucleotide)
GATTTGTAGAAAATGGCGTCAACGGAGTTTTTGGAGGAAGCTTTGTCCACAGACGTCGAC
GAGAAAGCCGTGAACGCGATCGTGGGCACTCTCGAAAACCAATTAGTTACTAACGTATCG
TCGGCGCCGTCACAAAATATTTTAGTGAACGTTTTATCATCTCAGTTTCCCGGGCTAAGT
TCGAACGCGGGCTCTATTATAAGTGGTCATAAATATACAACAGGCGGAGTTAGCTGCGGT
ATTGCCGCGAACAGTATACACAGACCCTCGTTGACAAATAGCACGTCCTGTAATAATGTC
CAATCAAGTGTTCCTGGTACTTATTCCTCTTTGACACCGGGTGGTACTGTGACCAATTGT
AACGATAACATACAAGTTATATATTCTCAGGCTCAAGCATTTTCTAACCCAAATTCGGTG
ACATTTCCCGCTCAGTCACTTCCGAACGGTTTCGTTGGGTTGTCCTCGTCCCAAAATCAT
TTGATAACGTCAGTAGACGCGATGCAACCTCCTTTAGTTTTAAAACAGGGGACGTCTTCG
GGCCAAGTGGGAATACAGTCTGGAATGGTCACAGTACCGATGACAGCCAATTCAAGCATG
TCCGGTTCAATACCAAATGTAATGACTTTGAACAAACCTGGACAAAATGTAGTTGTAACA
ACTCAGAACTTGGGTTCGAGTCAGCCCACAATACTCCCTAATGTTCAGATTCTGAATATG
AGAGCTGGTGCTCCAGCAGTTGCGGCACAAAAGTCAGTAGCAACAGTATCACCAAGAGTA
GTGATAGGCACCCCACAAGTTGTTGGCACCAGAGCTGCAGGACCAGGCCATCCTGGCGTC
GCGACGGTGTCAACAAGCATGGCCTCCAGCCCTATACCGGGTCAGATGCCAGCTGCGCCG
ATGGCAACGCCTGTTATACCAGCATCTATACCAAATATAAACTGCGGTACGCCTCCGCCT
CAATCTCAACCCCCAACGGTAACAACTGTTAAACCTTCGGACAACACTAAGGAAAAATGC
CGTAATTTCTTAGCAAATCTCCTGGACTTATCAAGCAAAGAGCCTCCATCAGTGGAGATG
AATGTACGGAATCTGATCCAGGAACTTATCGACGCCCAAGTTGAACCAGAAGAGTTCTGC
AACAGACTTGAAAGATTACTTAACGCGAGTCCTCAGCCCTGCCTTATCGGATTCTTAAAG
AAAAGCTTGCCACTGCTCAGACAATCTTTGGTTACAAAAGAGCTTGTTATTGAAGGAATA
AACCCTCCAGCGCCTCACATAGCTTTCTCTACGATGCCATCTCCCGCCCAACCTGTGGTG
GCCACGTCCAACATACAATTGCCTTCAGAGGAAGATGGGTCGAGTCCCACGCTAACGCCT
CTCCTGCCGCCGGTAATGCCGCTCACGCTGGCCAACCTGACAAAGCCTATTAACGTTCAG
TCACTGCAGACGACAGCTCCCACACAGCAGCAAAAACCACCATCGAAACCGGGCAGTACG
ATAGCGGTTCTACAGAACATTCCTGTGCACACCAAGATCAACGTTAGCAAAGTCAGTAGC
GGCAAGTCGATGCAGTTGAACAACAAGGGCGCCTTCCCGAGAGGCCAATTGCCTTCAGCT
GCTTTATCAACCGTACTGACTCCTGGCAAGTCGCTTCTGAAAGATAAGGAGAAGAAATCT
TCTAGTTATTCGCAACCGTTCACCGACGACAAGATGGCTGGCGATGACGACATCAATGAC
GTAGCGGCCATGGGTGGAGTCAACTTGGCGGAGGAGTCGCAGAGGATTCTCGGCTCCACG
GAGATGATCGGAACTCAGATTAGATCGTGCAAAGATGAATATTTAGTGCCGACGAGCGTG
ATGCAAGCCAGGGTTAAAGCCATAATAGCACGACACAATCTCGACGAGCCGACGGGGGAA
GTGGCAGCCCTCATCAGTCATGCAGTACAGGAGAGACTTAAAAATCTTATCGAGAAACTA
GCTGTGATAGCTCAGCACAGAATCGATCATTTTATAAAGTCTGATAGCCGTTATGAAGTG
ACTCAAGATGTAAAGGGCCAACTTAAGTTTCTAGAAGAATTGGACCGGGTCGACAAGAAA
CGCAGGGAAGACTCAGAGAGGGAAATGCTTCTTAGGGCTGCCAAGTCTCGATCGAAGAAC
GAGGATCCCGAACAGGCGAAATTGAAGGCTAAGGCGAAAGAAATGCAACGTGCCGAGTTG
GAGGAGCTTCGTCAAAGGGAAGCCAACTTGACCGCTTTACAAGCTATTGGACCGCGAAAG
AAACCAAGACTAGAAGCACCAGGCGCCTCCGGAGACACAGCCACTCCTGGACCGCAGACT
ACTGGATTTCCTGGCCGAAGTCAACTAGCCCTCCGGACTCGTCTGAAGCGCATCAATCAC
CGTGACATGCTATTCCTGCTCGAGCAAGAGAGAGACACCTGCCGATCGTTGTTGCTTTAC
AAGAGCTACTTGAAGTGACCCGCGGCCGAAACCTACACTAGGAGCGACGTCGACCGTTAC
ATCGACTGGCTCGCGACCAGATACGATGATTGAAAACGTCACGCTCCTACTGTAGCGTAC
GTGTGCACCGAAAGTGTTACACGTGAGAACTGTCTAAAAATTTAAACGCAGTAAAGTTAT
TCCTGATGCTGACCGAATGAATTGGAGAATAATGTTCATACCAATGGAATGATGAAAGCG
TTTTGTTATAGTATCCTGATTTGTTACAATGCTGTATCATTGTGTACAACAGTATACAAC
AAATGCTGCGTCTTAGATGGCCGAGACTAATGAGTATTCAAATATTGACTTAATACCGTC
GTGATGTTGTATTTGAAGCAAGCCTTAATAATGATTCTAGTTAAACGGTGACTATGCGTA
ACTTGTTGAATAATAACTGATTCATAAATTTGAAAACATGTGCAACGAATAATGCAGCAG
GTAGGTTTATCATTCGTCTTTCGTACAAAGTCAAAATGCCTTGGAACTCGATTTTTATTG
TATGGAGTCCTTGTTGATGTTATATAAAAATTTAATTGATATACAATAATAACTACATGA
TGGTTAAACTTGAGCCATTCAATACATTAAACAGTCGTTTGATGAACCGATTTTGGTCGA
TATGCACGGTATGACAAATAAAGTGATTGTTTTAATAATAACATAGAACTCTGGTAGAAT
TGATGGAAAGTATAGTTGTTATAAGCGTTACGACATGTATTGAGACTAAGAAGATATTGG
GCTAAGAGCAGCGCAGTGACTGTCTTGGTAATGATTATGATCACCTTTCAGAATAAGTTG
CCTCTCGAAGGAAAGAGTACCAGAATAACTTATTCTAAAATTGTGAACTTTCGGGCTCCT
TAAATTATATATAACTGATTAGTTAGGAGTATTCAGGTAATAGATATAACAAATGACATA
TCGAGGATATAAGGAAGCGTGTCGGAGTGGAAAAAAGCAACTTGTGGTCGTCGTGGCTTA
AAGGATAAGACATCTGATGCACTATTATCGAGCGATGCGATTGTGTCGGAATTCAAATCC
CGCAGGCGTTTAACAATGTTTGTAATGATATACTTACTGAACCTATGTTCACGAATGACT
TACATGATGAAGGAATAACCTGAGATGTGTAACCTGAGAATTATGTGTACTGGTTTCAAA
GATGGCACAGCCATTATGTAATAAATTATACGTACTCTTATTTTAAGAGGTAATATTGAT
GACAATAATAATTAATGACAAAACTAAAGTCCACAGGGGGACTCTCAAGTTACTAAAAAG
CCATTAACTATTTATTGTTTATCAGTCCAACTATAGTAGCTAAGAACTTATGCACCACTC
TGAATACAATTAAGAATATTTAAAATATTAAGAAGCGTACAGAGAAAGGGGACAGATAAT
AGACATAGACTCGTGAATTATAATTTATAATTAAGGGCATAACGTGGGAGGAGCTAGAAC
ACACTGCCCAAAACCGATGTAAATGGAAAAATTTGATTCGAGCCCTACACCCCAGCAGAG
GATAATAGGAAAGAATGATGATGATGATGATTCTATGCTGTAACCACATGTCGAACACAT
GATTATTGGATTTGTTTATATAGCCA
(4106 bp)

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