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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30225_c6_g2_i2
Scaffold_idBomo_Chr14
NCBI non-redundant
(nr)		transcription_initiation_factor_TFIID_subunit_4_isoform_X6_[Bombyx_mori]
Ontology
GO:0001075 F RNA polymerase II general transcription initiation factor activity
GO:0001092 F TFIIA-class transcription factor complex binding
GO:0003677 F DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005669 C transcription factor TFIID complex
GO:0006351 P transcription, DNA-templated
GO:0006352 P DNA-templated transcription, initiation
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0006367 P transcription initiation from RNA polymerase II promoter
GO:0007517 P muscle organ development
GO:0008134 F transcription factor binding
GO:0022008 P neurogenesis
GO:0045944 P positive regulation of transcription by RNA polymerase II
GO:0046982 F protein heterodimerization activity
GO:0048813 P dendrite morphogenesis
GO:0051123 P RNA polymerase II preinitiation complex assembly
Transcript
Level		FPKM:2.52 TPM:1.40
ORF EntryO_BomoIG1495_5prime_partial:A_BomoIG_DN30225_c6_g2_i2
Sequence
(Nucleotide)
CAATAACGTTCAAATTTGTAATCGCAAAATTTGGATGTTTGGATGATTGGATCCATTCCA
ACAGATCGTGCAAAGATGAATATTTAGTGCCGACGAGCGTGATGCAAGCCAGGGTTAAAG
CCATAATAGCACGACACAATCTCGACGAGCCGACGGGGGAAGTGGCAGCCCTCATCAGTC
ATGCAGTACAGGAGAGACTTAAAAATCTTATCGAGAAACTAGCTGTGATAGCTCAGCACA
GAATCGATCATTTTATAAAGTCTGATAGCCGTTATGAAGTGACTCAAGATGTAAAGGGCC
AACTTAAGTTTCTAGAAGAATTGGACCGGGTCGACAAGAAACGCAGGGAAGACTCAGAGA
GGGAAATGCTTCTTAGGGCTGCCAAGTCTCGATCGAAGAACGAGGATCCCGAACAGGCGA
AATTGAAGGCTAAGGCGAAAGAAATGCAACGTGCCGAGTTGGAGGAGCTTCGTCAAAGGG
AAGCCAACTTGACCGCTTTACAAGCTATTGGACCGCGAAAGAAACCAAGACTAGAAGCAC
CAGGCGCCTCCGGAGACACAGCCACTCCTGGACCGCAGACTACTGGATTTCCTGGCCGAA
GTCAACTAGCCCTCCGGACTCGTCTGAAGCGCATCAATCACCGTGACATGCTATTCCTGC
TCGAGCAAGAGAGAGACACCTGCCGATCGTTGTTGCTTTACAAGAGCTACTTGAAGTGAC
CCGCGGCCGAAACCTACACTAGGAGCGACGTCGACCGTTACATCGACTGGCTCGCGACCA
GATACGATGATTGAAAACGTCACGCTCCTACTGTAGCGTACGTGTGCACCGAAAGTGTTA
CACGTGAGAACTGTCTAAAAATTTAAACGCAGTAAAGTTATTCCTGATGCTGACCGAATG
AATTGGAGAATAATGTTCATACCAATGGAATGATGAAAGCGTTTTGTTATAGTATCCTGA
TTTGTTACAATGCTGTATCATTGTGTACAACAGTATACAACAAATGCTGCGTCTTAGATG
GCCGAGACTAATGAGTATTCAAATATTGACTTAATACCGTCGTGATGTTGTATTTGAAGC
AAGCCTTAATAATGATTCTAGTTAAACGGTGACTATGCGTAACTTGTTGAATAATAACTG
ATTCATAAATTTGAAAACATGTGCAACGAATAATGCAGCAGGTAGGTTTATCATTCGTCT
TTCGTACAAAGTCAAAATGCCTTGGAACTCGATTTTTATTGTATGGAGTCCTTGTTGATG
TTATATAAAAATTTAATTGATATACAATAATAACTACATGATGGTTAAACTTGAGCCATT
CAATACATTAAACAGTCGTTTGATGAACCGATTTTGGTCGATATGCACGGTATGACAAAT
AAAGTGATTGTTTTAATAATAACATAGAACTCTGGTAGAATTGATGGAAAGTATAGTTGT
TATAAGCGTTACGACATGTATTGAGACTAAGAAGATATTGGGCTAAGAGCAGCGCAGTGA
CTGTCTTGGTAATGATTATGATCACCTTTCAGAATAAGTTGCCTCTCGAAGGAAAGAGTA
CCAGAATAACTTATTCTAAAATTGTGAACTTTCGGGCTCCTTAAATTATATATAACTGAT
TAGTTAGGAGTATTCAGGTAATAGATATAACAAATGACATATCGAGGATATAAGGAAGCG
TGTCGGAGTGGAAAAAAGCAACTTGTGGTCGTCGTGGCTTAAAGGATAAGACATCTGATG
CACTATTATCGAGCGATGCGATTGTGTCGGAATTCAAATCCCGCAGGCGTTTAACAATGT
TTGTAATGATATACTTACTGAACCTATGTTCACGAATGACTTACATGATGAAGGAATAAC
CTGAGATGTGTAACCTGAGAATTATGTGTACTGGTTTCAAAGATGGCACAGCCATTATGT
AATAAATTATACGTACTCTTATTTTAAGAGGTAATATTGATGACAATAATAATTAATGAC
AAAACTAAAGTCCACAGGGGGACTCTCAAGTTACTAAAAAGCCATTAACTATTTATTGTT
TATCAGTCCAACTATAGTAGCTAAGAACTTATGCACCACTCTGAATACAATTAAGAATAT
TTAAAATATTAAGAAGCGTACAGAGAAAGGGGACAGATAATAGACATAGACTCGTGAATT
ATAATTTATAATTAAGGGCATAACGTGGGAGGAGCTAGAACACACTGCCCAAAACCGATG
TAAATGGAAAAATTTGATTCGAGCCCTACACCCCAGCAGAGGATAATAGGAAAGAATGAT
GATGATGATGATTCTATGCTGTAACCACATGTCGAACACATGATTATTGGATTTGTTTAT
ATAGCCA
(2347 bp)

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