SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30224_c5_g4_i5
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		WD_repeat-containing_protein_3-like_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0031965 C nuclear membrane
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:1.03 TPM:0.57
ORF EntryO_BomoIG1653_internal:A_BomoIG_DN30224_c5_g4_i5
Sequence
(Nucleotide)
GCCACGCGCTGGTGGGGTGTGCGGGGGGGGCGCTGCTGGTGCTGGACGTGGCGGCCGGAC
GACTCCTCGAGACCATACCCGCGCACACGGACAACTGCACCGCCCTAGGACTCACTCCGG
ATCTGAGAGGCTGCTACACGGGTGGAGCCGACAAAACTGTAAAGCTATGGCAGTTCGAAT
TAATAAATGATCCAATAGTCGAAGCCAAAGGAAAGGTTTTATCATTACTTCATACTAGAA
CACTGAAATTGGAAGAGCAAGTGTCAGCTGTAAAAATCAGTCCCAACAACAAATTCATCG
CGGTCGCCTTATTAGACTGTACTGTTAAAATATTTTTCCTTGATACATTTAAGTTCTACC
TTTCTCTTTACGGGCACAAGCTGCCAGTGCTCTGTCTGGACATAAGCTACGACTCGAACC
TCATAGCTACGGGCTCGGCGGACCGCAACGTCAAGACGTGGGGCATGGACTTCGGCGACT
GTCACAAGTCGATATTCGCGCACAACGATTCCATAACCGCGCTGCAGTTCGTGCCCAACA
CGCACTACTTCTTCAGATCGGAAGAGCACACGTCTGAA
(578 bp)

- SilkBase 1999-2023 -