SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30224_c5_g4_i4
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		WD_repeat-containing_protein_3_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0031965 C nuclear membrane
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:0.28 TPM:0.16
ORF EntryO_BomoIG1651_complete:A_BomoIG_DN30224_c5_g4_i4
Sequence
(Nucleotide)
CTCTTTAAATAAAAAAAATACCCTAAAGCGTGAAATTAATAACCATAATCTTTAAATTAA
TGGAATAGCATAAATAATAATATGTTTTGCTTAACGACTCTTGTATTGTTTCATTACAGG
CACCCGTACCTGGTTTACCGGGTCTTCAAATGCCAACTAAGAAAACTATAGGCGCAGAGA
AAGCTGCGGATTCGATCATGGAATGCTTGTCAGTCGGCGCTGAATACAAGCGCGAGCTAT
CCGAAGCTCGGGGTCAGTTCGTTCAGCCGCCCCTCCTGATGGCTGCCTTCAACTGCACCA
CACCCGAGGACTTCTTCGTCGAGACCGTCAAGAGAGTCAGATCAAGTGATTTAGAAGAAG
CCCTGCTGCTGATACCGTTCAGCGTGGCGTGCGACATAGTGCGCGTGCTGCCGACGCTGT
TGGAGCGCGGCGACCACACGGAGCTGTACTGCAGGGTGGCGCTCTTCCTCCTCAAGATAC
ATCACGCGCCCCTCGTCGCCAACAAGGCTCTGTTAAAGCACATCATACAAATACAAGCGA
AGGCCTCAATCAAATTAAACGAATTGAGGGATATGGTCGGATATAACCTACACGCTCTAC
AATGGATGAAGCGAGACATCGAGGCGGCTGAAAGCGTGCAGTTGTTCAGAGAGGCGACCC
AAATGAGAGTCAACAAAGACAAGCGTCGCAGAACCCGGCAAGCCCTCAAGAGGCCCATTG
TTACAGTTACGTGATCATAATAATGTAACATAAAAATGGAGTTTTTAATAATTTTAATAA
ATAAATGAATATACAGTTTTAAGTCCATAGTTGGAAAAGCCCCTAGGGTACCAACGATTA
GATAGGAAAACGAAAATAGTCACGTACATAAATGTACATTTATCCTATGTTATCAAAGAA
ATAGGAAGTTGTAACTATTGTTATTCAATTATAATTAAACATATTATGTACATATTTAAA
CATAATAATAATTTAAAACAAAATTGTA
(988 bp)

- SilkBase 1999-2023 -