SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN30224_c5_g1_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		WD_repeat-containing_protein_3-like_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0030515 F snoRNA binding
GO:0031965 C nuclear membrane
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:3.93 TPM:2.19
ORF EntryO_BomoIG1631_internal:A_BomoIG_DN30224_c5_g1_i1
Sequence
(Nucleotide)
CCCGCACACCCCACCAGCGCGTGGCGGTCACCCGGGGCCAGCGCGGCGCACAGCGGCCGC
CCGCACGGCACCTCCATCGTACGGATGCACGTCTGACTAGATCTATTCCAGAGTTTGATG
GAATCTGCTGATGCAGACAGTATTGCTAAGTTATCTGAACTGATCACTACACATCTGGGG
TCCTTTTGATGACCAGGCTGAGTTATTTGTTTTAAGCACCGCACTTCATCTCCATCTTCT
AGTTTCAAACTATGCAGTTCAACTGTATTGTTAGCCAGTGTAATACCAACACGCACCTCC
CCTGTGGTACCCAGTAACAATGTTGCAGACTTTAACTTGGAATTCACCTTAACTGAAGTC
AGCCTTCTCACTTCATCTGATAGTGTTAATATTTGGGGTATCTCTGTAATTTCCGGGTCC
ACTTCACCAGTTTCTTTAAGTTTAGCTAATTTTTTTCGTCGCTTCTTTATTCGTTTATCC
ATTCTCATTTTAGCCTGTTCATCTGAGCAGAAAGCAAAAAGTTCGAGAAGGGAATCGGTT
CCATAACAGGCTAATACAGTCTGCCCTGGGTCCGTTGCAATACCCACAACTCTTCCTTTA
CCACCTCTTACTAATGTTCCAACTTGATGACATTGTAAAACAGAGCTCTCTTCGATTTCG
TCAGTTTCTTCTAGTTTGACTATTTCAAGTTGATGTTTTAGTTTATCCTCGTCTTTTACA
TCCTCAGTCCAGTTTAATTTCCATACTCTAAGCTCTTGGTCCATACTTCCTGT
(773 bp)

- SilkBase 1999-2023 -