SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29895_c5_g3_i3
Scaffold_idBomo_Chr4
NCBI non-redundant
(nr)		protein_FAN_isoform_X1_[Bombyx_mori]
Ontology
GO:0005057 F obsolete signal transducer activity, downstream of receptor
GO:0005515 F protein binding
GO:0005543 F phospholipid binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006672 P ceramide metabolic process
GO:0007165 P signal transduction
GO:0012505 C endomembrane system
GO:0016230 F sphingomyelin phosphodiesterase activator activity
GO:0019898 C extrinsic component of membrane
GO:0043065 P positive regulation of apoptotic process
GO:0043085 P positive regulation of catalytic activity
GO:2000304 P positive regulation of ceramide biosynthetic process
Transcript
Level		FPKM:0.52 TPM:0.29
ORF EntryO_BomoIG103029_complete:A_BomoIG_DN29895_c5_g3_i3
Sequence
(Nucleotide)
CTACAAAGGTAATAAAAAAAAAATACGCCACGTGCACTACGCCCGTGGTAATTTCTACCG
CAATGTTCACTACGCCAGTATGAATACGTACCGTCGTGTGCATTCAGCTCCGCGTTCTGT
GCTACAGTGAGCATGTTCCATTGTCGGAGCACGCCGGACCCTCCGCCAATCCACAATAAA
CTATTACCGTCCCAGTACAGCGACCTGCCGATATCCGGTAACTTCTTCTGGTAGACCGAA
TGCAGAACGCTGAGATCGGTAACAGTTATGTCTCGCTCCGTATTGGCCGTGACAATCCTA
TCTGCGGATAGTACGAAGCAAACGCAGGTGATCTCGGAAGGGTGAGCAGAGAACTTGGCA
ATCAGACCTTTATTATTCAAACTCCATATGAAAAGTTCACCATCCGAAGTGCCCGTTATT
ACATCAACTTCGTGTCGACGTCTTCTGTGAGTCAAACAGGTTATCTTTCCGTCGTGATCG
AATTCCATTTTGAGACCCCGGAGTGCTTGTCCAGTCTTTCCAATGTTACCCCACACACGG
ACAACGCCGTCGCAGCCGCCGGATATTAGAAGACGTTCTTTATGCAGCCACGTGAGGCAA
CTGACAGAATCATCGTGAGCTCGAAAACTTTCCACAACTCGACCGTACTCCACGTCATAT
AGGTATATTTCATTGTCCCACGCTCCAACGGCGACAACGTTATTATCAACCATCACGCAA
CAACTCAACGGCGTGGGCGACAGAGCCACGCTTCTAATCTGCTTCCTCTTCTCGGCATCA
TAAACCTTCAAAGTCCCGTCTCTTCCAACAGAAATAATCCTTTCCGATTGACGGACAACA
CACGTAACCGACTCTTTATGCAGCCTTATAACGTCAATGCACTCGATTCGATAGCTCCGG
TTCATTTCGCAGCACATGGGCTTGGCGATCTGAGGCGAGATTCTTCGGACGTGCGGCTTC
GTGAACAGTTGTTTCGGAACTTGACCAAACTCCATAATCTGCACTTCCAGAGCGTGTCTG
TCGTTCATATCGTAAATGCATTCCAAATCGACCGAACCTTCGTAGCATACATGGTGGAAT
ACGTTCTCAGCCTTAATAGCTTCTTCGCCTCTTTGTTTATAACCAAAAATCAAATCGATC
CATAAATGTATGTGTTTGGACACATAATTAGACTCTAAAGCGTCTCTCAGCTTACATACG
AAGTCTTCGGGAGATTTCGCCCATGGCGGTAGCGCCACGTCATTCACTTTGGTACCATCA
TGTCGGGAACCAAAGTCTATTTCGAATTTGTTTACCAGGAAATCCCCTTTCGCTTCTACA
TCATAAAATTCTGGAACTAATTCCTTAAAATCAGACATATTTTTCAAACAGTTGTTGAAC
ACATCTTTCATTGAATTGAACATTCTGTCGGGATGATCGAAACGTCCATTTTGGAGGCAC
AACATGTACTGCGGGTACTTACGAACCAAATAAAACAAAACAAGTCCAGGGGCTGAATAA
TGTGAACCATATAAAAATTTTGGGTCTGTCATCTCATGAAATCTTTCTTTCAGTTTCTCC
AAGCGATCAGGATTTAGTGCACCCATTGGTTTTGATAAATCCCGAAATGTTTCAGGCTTA
GTAAAATCTATTGTTTCTGATGTGTAGTCAGCTATGATCCACGGAAACACAGGGTACTGT
GTTAAATCATTTTTACTTCTATCAGCCATACAATTTAGATAAGTCAAATAATCATAGTTA
GACACAACTCCATTTTGCCACTGCAATGTCATCTCTTCAACATGCACTTTCTCCAAGCTG
ACATGAGGTGATTCCTCAAGTATCTGGTATATCCTATTCCGCTCATATTCATTTTCGAAA
GTGAGGTATATGTGAGGAACTGAACTTTCTTCTGTACTGTATATTTCAAGCCCCTTAGTA
AAAAACGTCTCTTGTATATTCTCTTAAGGTTTTTAAACTTTATTTTCAGTATGGGGATAC
TCTCGATATTACTGAATGGCTGAAAATAAATAGTTGTGGGCGTCAATGCTAATTTTCCTT
GATGTCTCACTAATGGAGATATTTTTTCAGCTTGTAGTTCACAAACTATTTCTTCAGTGA
AATCATCCATCATAACCGGATCAAACTTCATCCTCATATACCTTGAATGCAATATTGTAG
CCACCATACTGTTGTGTTCCGGAGCATGCAGTGTTGATGCTCTGAGCAACTGCTGCATTT
GTCCTAAGCATTCCTCTGCTGATGCAAAATCGAAAAATATATAAAAATCTTTTTTTTCAT
AGAAAAATTTATATGGTGCTAGAATATTTTCTTCTAACATTTCAGCATATTGCTTCACCT
TTACTACAATAACATTATTCCGTTCAGTTGAATCAACAAGACAAAGTTCAACACAGTCTC
TAAATTGTAGTTTAATGAGGGGATATGTCCAATCTCTTGGTTCAAATAAAAGAGACTTAG
AACACAACTTTAAGCGACCTTCTCTGAAATAGTCACTCTTCAGTGAATTCTGTTGAGTTA
TAATGCATGAATAGTCTTCGAAGTATATTTCTCCGGGCTCCAAAAGAAGCATTGAAAATC
TCGATTTATCCATTGTTCACTCTCGAGTTTCTTTTGGTTATTTACAGTAGTATCTTTTAA
ACTATGTAAATATGGCGACAGTAATACTACGTTTGAGTAATTATTGCCTAAATATAAATC
AAAACAAAGGTTTGTTTTGTAATGTATCGGCTGGATTATATATTTATCAACGTTTTAGGT
CCTGGCTTTTCAAGTTTAAAATATTCTCTCAGGTGGCTTGTGAATTCACTCTGAAATTCA
TTGGTTTGTTTTGT
(2834 bp)

- SilkBase 1999-2023 -