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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29871_c5_g3_i2
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_BRCA1-associated_RING_domain_protein_1-like_[Bombyx_mori]
Ontology
GO:0003723 F RNA binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031436 C BRCA1-BARD1 complex
GO:0042325 P regulation of phosphorylation
GO:0042803 F protein homodimerization activity
GO:0043065 P positive regulation of apoptotic process
GO:0043066 P negative regulation of apoptotic process
GO:0043231 C intracellular membrane-bounded organelle
GO:0046826 P negative regulation of protein export from nucleus
GO:0046872 F metal ion binding
GO:0046982 F protein heterodimerization activity
GO:0070531 C BRCA1-A complex
GO:0085020 P protein K6-linked ubiquitination
Transcript
Level		FPKM:3.16 TPM:1.76
ORF EntryO_BomoIG104042_complete:A_BomoIG_DN29871_c5_g3_i2
Sequence
(Nucleotide)
GTTTTGATGAATGAAAAGAAACAATACATTAGTGGCAATTTATTTTAAATTGGCGCAAAC
AAAGTTTTGAACTATTAATTAAACTTTTACGATTGTGACAGAAAAATGTCTTCTAAAGAC
TTAAATAACTTCTTAAAAGCATTGGACGCAGTCAAAGAAGATTACACTTGCGGCGTCTGT
TCAGAACTCTGTAAAAATCCAGTGACTTTGAGTAAATGTTTTCATTTGATATGCGCTAGT
CACTTCGAGGGCTTGGACGCTTGTCCGACCTGCGGGACGAATTTAGAAGGTTGCAAAACC
TTCACCGACGAACGTCTTGCCGTATGCATAAACTCGGCGAATAAATTAGACGAGATATTC
AGTTGTTTTAGATCTAAAGAAACGTCTACGACAAAACAAGATAAAATCGAATCTAACAGT
AAAACCACGTTAACAGATGTCCGAAAACCTCAGGCAAAGCTCCGAAGCCACGATATTTCA
ATAGCCAGCAGTAAATTCAGCAAGTCCAGTGAAAAACGCAATAATAAAGGTGAAACGCCA
CTACACATCGCCTGCAGGTTAGGTAAAGTTGACAAAATCACCGAACTATTAAACCAGGGC
GTCAATACGAACACTAAAGACAATGCCGGTTGGACGCCTTTACATGAAGTTGTTCAAAAT
GGACGACTCGACTTGGTCACTCTTTTACTCCAATATAACACTTTAATTGACGTGCCGGGG
CTCAATAATGAGACACCATTGCATGAAGCAGTCAGATACGGACACCGAGAAATCATTGAA
GAACTTGTCAAACATGGAGCGGACATAAACTGTAGGAATTCTAAAGGGGAAACTCCACTG
CAGCTAGCTACAGATGACTTGAAAATAATATTAAAGAAGGCATCAGAGAGTTTGATTCAA
ACACAGTCCGTTAATGTGACTCACATGTCGATCTTGCACTCAGAGTTAGATTTTGATGAT
ATAAGAGTCTATTGTGTATCTCAGCAGAAGTCGGTTGTATCAAAACTAAAATTGCTTTGT
AAACAACACAGCAATTTGCATATTGAAGTCAAATTTACAAAAAAAGTAACACATTTGATC
GTTGATGCCGAGAATGGTATATGTATGTCGACAATAGATGTACTGCAGGGGATCGTGAAT
TCCATATGGATATTAACGTCAGATTGGGTCCTGAAATCTACAGAAGATAGTTTGGAACAG
TTTGAACAATTTGAGGTTACTGGAGTGGGTACAGCATCCTACAACGGTCCTAAAACAGCT
CGTTATAACAAATACAAGCAACTACCAGGAGTGTTTGATGGCTGCCACTTCTATCTACAC
AATTTCAATATGAAATACGAAATATCCAAGCACCTGGTGCTGACCAAAGCGACTATAAGC
AAGCTGATTACTGATGCAGGCGGTATAGTGCTCAGGAGAGTGCCCAACCCGGAATCCATA
CCGGACCAAGAGAAATTGGTGCCGTATCATGCTAAAAAAGATGGAAAACTATATATTTGT
TCGCATTATATAATTTTTAAAGACACGTACCAGCCAATGTATAATATGCAGCATCTTAAA
GCGCTGCCAATAGGCTGGTTGATTGAGTGCATAGAGAGATATGAACTGTGTGATCCGTGA
TAGAGATCGGAACTTGTTCCTTGAAAGCAACAAAACTGATAATCTATATATTAATATGTG
AAGCAAAAACTTTGTACACCTTTTTACGAAAATTGCGTGGAAAATCCTCCGTATGAATTT
TCCCACACTTACAGAGAATATAGGGAAGAAGTGCAGAATGCTAATATTTTTTTTAAATTA
TGCATTA
(1807 bp)

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