SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29870_c6_g3_i4
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		serine_hydroxymethyltransferase_[Bombyx_mori]
Ontology
GO:0003682 F chromatin binding
GO:0003824 F catalytic activity
GO:0004372 F glycine hydroxymethyltransferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005743 C mitochondrial inner membrane
GO:0005758 C mitochondrial intermembrane space
GO:0005759 C mitochondrial matrix
GO:0006544 P glycine metabolic process
GO:0006545 P glycine biosynthetic process
GO:0006563 P L-serine metabolic process
GO:0006564 P L-serine biosynthetic process
GO:0006730 P one-carbon metabolic process
GO:0008284 P positive regulation of cell population proliferation
GO:0008732 F L-allo-threonine aldolase activity
GO:0015630 C microtubule cytoskeleton
GO:0016020 C membrane
GO:0016597 F amino acid binding
GO:0016740 F transferase activity
GO:0019264 P glycine biosynthetic process from serine
GO:0030170 F pyridoxal phosphate binding
GO:0034340 P response to type I interferon
GO:0035999 P tetrahydrofolate interconversion
GO:0042645 C mitochondrial nucleoid
GO:0042802 F identical protein binding
GO:0046653 P tetrahydrofolate metabolic process
GO:0046655 P folic acid metabolic process
GO:0051262 P protein tetramerization
GO:0051289 P protein homotetramerization
GO:0070062 C extracellular exosome
GO:0070536 P protein K63-linked deubiquitination
GO:0070552 C BRISC complex
Transcript
Level		FPKM:0.96 TPM:0.54
ORF EntryO_BomoIG103815_complete:A_BomoIG_DN29870_c6_g3_i4
Sequence
(Nucleotide)
CATAAATAGGTGAAATTACCACCAAACCGTGCTCTCAAGACGACATTCCACTAGTAATTG
TGCAAATTATAATATTTGCCGGTTTGATTTTTATTACGTGTTGTTTTTTTTTTTTTATGC
TACAGGTGATAAAGAACGCGCAGCGGTTGTGCGAGGGTTTAATATCGCGCGGGTACTCTA
TAGCGACGGGCGGCACCGACGTGCACCTCGCGCTCGTGGATCTGCGCGGCGTCGGGCTGC
GGGGCGCGCCGGCCGAGCGCGTGCTCGAGCTCTGCAGCGTGGCCTGCAACAAGAACACCG
TGCCCGGCGACATTAGCGCGCTCAACCCCAGCGGCATCAGACTCGGTACACCAGCGTTGA
CCACAAGAGGTCTCAAGGAAGCTGATATTGATAAAGTTGTCGATTTTATTGATAGAGCAT
TGAAAATAGGTCTAGAAATCATTAAGGTTTCCGGGCTGAAACTTGTTGACTTCAATAAAG
CCATTGAAGAAAATGCTGAGTTCAAAAAGAAAATTGAAAATCTGAAGGAAGAAGTTGAAA
ACTACAGCAAATCATTCCCTTTGCCTGGGTTCGATAAATATTAAGATTAACTTGGATAAG
TTTAATATTAAGAGCAAATAATTGCATTTATATCATATTTTTTATATGAAAATCCTATTT
TCGGCTATGCAGTTTATTTATTTTTTTAAATGTTAGATGTAACAGTATTTAGAATCTCGA
ATTCCATATTTTGATTAAAGTTTACACTAACAGAATTAAAAAAAAA
(766 bp)

- SilkBase 1999-2023 -