SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29866_c7_g3_i4
Scaffold_idBomo_Chr23
NCBI non-redundant
(nr)		vacuolar_protein_sorting-associated_protein_13A_isoform_X2_[Bombyx_mori]
Ontology
GO:0005622 C intracellular anatomical structure
GO:0005737 C cytoplasm
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005829 C cytosol
GO:0006623 P protein targeting to vacuole
GO:0006895 P Golgi to endosome transport
GO:0007005 P mitochondrion organization
GO:0019898 C extrinsic component of membrane
GO:0042593 P glucose homeostasis
GO:0045053 P protein retention in Golgi apparatus
GO:0070062 C extracellular exosome
GO:1905090 P negative regulation of parkin-mediated stimulation of mitophagy in response to mitochondrial depolarization
Transcript
Level		FPKM:0.30 TPM:0.17
ORF EntryO_BomoIG103749_5prime_partial:A_BomoIG_DN29866_c7_g3_i4
Sequence
(Nucleotide)
CTCACATGTTTACGTAGTCCAAACTAATTTCGTCAATATAACCTAAAATTATTGCTGTGA
TAAAACGTCGATTGCATTTTCTTATCAGATTATATCTTACCCTTATTTAGCAGATTTTAA
CAGGTACTTTTTCACAGAGTTTTTCACGTCACGTCTTTTTCGCAGAGACGGTTCTCCTTA
CACTTCTACCCTCCATAGTAGAACGAGACATGTAACATAACCTCAAAAATAATTTATTCG
GCAGTGCACCTTTTATCTTCGAGCGCCAGTATGAGTGCGCATTGGATCTTCGCAGCGAGC
CACTTGAGGAGCTCAGAATCTGATACTTCTATTATCTTCTCGTCGGTTGAAAAATAATTT
ATTAATTCGTCCTGTTTGACGGTGAGTTTAATTTTGTTACCCTCGACGGTAGGTGGAGCA
GTGAGCTGGTCAAGCGTCACCGTCCACTCCACTTGCCAGGAGCCGCTCGTTCCACCAGAA
CGCACCATATACAGTTGATCTGTTGTAAGCAGCACGGTGCAGTTAGAGCGGTCGGAGAGG
TGTGCGTGCGCAACGTACGCGTGTGCGTGCGTGTGCGGACACACGGTGCGGACCAGCTGA
GCCCCGAGGGACGCGTGACACGAGTAAGGGCGAACACCCTCGATCGGTGAACAGTATCGC
GGGATCCTCATTCTTGGAACCAGTCGGCCTCCGCTGCGTTCCGCGCAAGATTTGAGCGCG
TGCACGGCTCCTTCCATGCACACCTGACGCGTCAGGGAGGCTCGACTCGCCTCACGACAC
ACGTCGAACGATGGTTTGGCTACGAGTGCTGTGAGCGCTAACGCAACAGTAGCTGGGTTG
TTTCTATCACTTAAGACCACCGACGACGGTAAGTCATTACTGACTGATTGATCACCTGGT
CGCCTCTTGGAGGTCTGTTGTCGCGGTAGCTCTTCGAATGTGATGTTAGATTTGTTGTTC
GCATTCACTGTCTGTCCCAGCATCGAGGACACGGTCTCCTCCAGGTGCTTCGAAACTATT
AGAGACTTCTTGTCCAACGCTGTACCCATATAAGGTTCGTAATATTGCGCTGCTTCAGCA
TCCGTGGTCCCAAGACAGAGCCGTGGTCGAGCGAACGGGTTGCCCAAAACGCTAAGCCCT
AGCACCAGCACGTGGAACTGCTGCACCAGCTGGATCCAGTAGTGGCGCTGGGCCAATGAC
AGTAACGCCGATCCTGATATTGGCGCGTTTCGAACTTCTAGATATGACATCCTCAAAACA
ACATCCTTCATATCACAGAGCGAAGAACCCCATGAGTTGAATAGATATTCTAATAGATCA
CTATTGAATAATTTAGGCCTGTTCTCCTTTTTATTACCCAACTTCATCTGTTCTGGAGTA
GCAGTAAATTCCGCTAGATATCCTCTAGAAGACAAACTCAAAGCAATCCTGACCGGCGAT
AGATGAACATATTCAAATATAACATTCTTCTGGTTATTGTTCTGACTTTTGGCAGCCACA
ATAGGTATCGGCATGTGCACTAAAGCCAGATCTGCTCTCAACCTCACAGCTGGCTTCTCT
TCCACCTTCCAATGGTTTAACAAATCGAAAACGTAATTTACGAAACCCCGATCCAAGTTC
ACGGAGTACTCCTGAAGGAGCAACTTTAGATATTTGTACACGTCTTGGTTTAGCGAGGGC
CGGTATTGCTTCAGAGCCACGATTTCTAGGCAAGGTTTTAATTGATTCGACTTAACATCC
GAAGGCAAAGGAGCCGGACAGAGAACAGTCGGAAACACAGCTTCTTGCAGCTGATTATCA
ATCTGTATCCTTTGGAATTTGAGATGTAAATATGAGTACGTGTCAGACTTGCGGAATTGC
AACCATAGGCCCGGGTTATACGTTCGCTTCAACTCGGCGAAGAAAGGTTTCGTCATTTGC
ATCTTCTCCAAGTCTAAATGAATGTATTCTTTTAATTCACATTTGTTTTGGTTCGCGCTG
TATTTATCTTCGATCCAAGCCGTCAAGTCCGGAGACAGCTGTTTCCATTTATGACTGACA
TTGACCTCCCATCTCGGCAAGGAGTCCGTGATACTCACGTACGCCAGTTCCTTGACCCCG
TGAATACTTTGAACGCACACAGATAAACTCACGCCAGAAAGAGACATGTAAACTTCATAA
TTACTTTTTTCAGCGTTAATTCTCATTCGATATTGATAGGCGATTCTCTCGTCTTGGGCC
AAAGCAAACACTCGTTGATACCCGTCCATATAGGACGTCCAGTACACAATGACCTTATCT
TTTCTCATTTTTTTAGTCTTCATGAGGGCTTCAGGTAGGTCTGAGCTGTCAGAGTCGTCA
CTGCTTGAAGAGCACGGTTCAGGGGATTTGGGTGTCAGTCGTTTTAGAGTAGACGATAGT
TTGGAGGTCATGCTGTTTGTCGCGACCAGGGTGGAGTGTTTCACTGAATGGAAACTCACT
TTTTCTTCTCCGTAACCATCCTGTTCGAATTGCGCAATAAATCCTTTTCCCTTATTATTG
TAGATGTTCCATAACAGTTTTCTGTCCTTAGAAGGATCATCCCACGTATACAACATTGAT
TGATATGGACTTAACAGGGCCACTTGACCGGAATCCATCTGATGTAGCTTGAGGAACAAA
TCATCGCATAGATTATCGATTCTGATTGGCGCATCACCAGCAGCATAGGGTCTAAACGTG
ATCGTAAAGGGTTTGTCCGTGCCACCGGTCACTTCCACCGATATCGCTGACCCTTTATCC
ATCCTCAGTACTGTCATATGATTCTTCGTGATTGGGAAGTGCTGTGAGACAACATTCGAA
TCTCTGTACTTGCAGTGCATCGACATTGAGTCCGTTTGAGGCCAAAAAGGCGTACACTGT
TGGGGGGCGAGGTCGAACCAGAGATCTGCAGCCTCGTTCTCCTCCATGAACCGGAGATGC
CTCTTCGTGTCGTTGAAAACCAGGAAATACGGTAGGAGAGTCACTATCTTCGTCAATTGC
GGACACAACTCTGATAACGTTACATTCATTAGAATCCTGTAGTTAGTCCTTCGTTCTGTA
TGAGGGCATACGACCAAGCCTGGTACCCCGGCGGCGAGCCTGCAGGGCCGGGACCACGCC
GACAGGTGTGCGCGCACTCGGATCCGGGCACCCCTGCCCCCTGGCCTGCCCCCTACCCGA
CTCCGGACGCCCACCCCGTCCGACCACAGCAGGGGCTCCTCCGTCAGCTCATACACGCTG
TCCGAGTTACTGCTCTTCATCTGTAAAGGCAGTCCTGTCTTATTGATGAGCCAGTGCTGA
GCGTGCAGGAATAGCTCCCAGCACTCCCCGCGCCGCACCCCCGCGCGCACCGCGTCCCGT
GCCC
(3364 bp)

- SilkBase 1999-2023 -