SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29850_c5_g1_i11
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		1-phosphatidylinositol_3-phosphate_5-kinase_isoform_X3_[Bombyx_mori]
Ontology
GO:0000139 C Golgi membrane
GO:0000166 F nucleotide binding
GO:0000285 F 1-phosphatidylinositol-3-phosphate 5-kinase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005768 C endosome
GO:0005829 C cytosol
GO:0005911 C cell-cell junction
GO:0006661 P phosphatidylinositol biosynthetic process
GO:0006898 P receptor-mediated endocytosis
GO:0008270 F zinc ion binding
GO:0010008 C endosome membrane
GO:0012506 C vesicle membrane
GO:0016020 C membrane
GO:0016301 F kinase activity
GO:0016307 F phosphatidylinositol phosphate kinase activity
GO:0016308 F 1-phosphatidylinositol-4-phosphate 5-kinase activity
GO:0016310 P phosphorylation
GO:0016740 F transferase activity
GO:0031410 C cytoplasmic vesicle
GO:0031901 C early endosome membrane
GO:0031902 C late endosome membrane
GO:0032288 P myelin assembly
GO:0034504 P protein localization to nucleus
GO:0035556 P intracellular signal transduction
GO:0036092 P phosphatidylinositol-3-phosphate biosynthetic process
GO:0042147 P retrograde transport, endosome to Golgi
GO:0043813 F phosphatidylinositol-3,5-bisphosphate 5-phosphatase activity
GO:0045121 C membrane raft
GO:0046488 P phosphatidylinositol metabolic process
GO:0046854 P phosphatidylinositol phosphate biosynthetic process
GO:0046872 F metal ion binding
GO:0048471 C perinuclear region of cytoplasm
GO:1904562 P phosphatidylinositol 5-phosphate metabolic process
GO:2000785 P regulation of autophagosome assembly
Transcript
Level		FPKM:5.39 TPM:3.00
ORF EntryO_BomoIG103099_5prime_partial:A_BomoIG_DN29850_c5_g1_i11
Sequence
(Nucleotide)
CGCGGCCCCCGCAGCCCCCGTGCCGCCCCGCGCCGCGCCCTGTTCCTGCGACGACAAAAA
CGTATGCGACATTGAGGAGTCGTTCATACGGTCGATGGCTCAGTGCGTGCCGTGGGCGGC
GCGCGGGGGCAAGTCCGGCTCGACCTTCTGCAAGACTAAAGACGACCGGTTCGTGCTGAA
GGAGATGACGAAGCCCGAGTCGCAGCAGTTCCTGGACTTCGCCCCCCACTACTTCAGCTA
CGTGGCCGCGTGCCGGGAGGAGCGCCAGCCCAGCCTGCTAGCGCGTATAGTGGGGGTGTT
CAGCGCGTGCGGCGCGGACGTGCTGGTGCTGGAGCACGTGTGGTACGGCTGCGGCCCCGG
GGCGCCACGCTACGACCTCAAGGGCTCCTCGCGACACCGCCTGGCGCCGCAGCCCGCGCG
GCCCCCGCCGCAGCATGTACTCATGGACGAGAACTTGCTCAACTCGCGCTGGGAGCGGCC
GCTGTACGTGCAGTCCGCGAGCGGCGCCGCGCTGTGGCGGGCCGTGCGCCGCGACACCGC
CCTGCTGGCGCGGCTCGGCGTCATGGACTACTCGCTGCTGCTCGCCGTGCAGGACGACAC
GCTGCTGCTGGGCATCATCGACTACATCCGCACGTTCACATGGGACAAGAAGCTGGAGCA
CCTGGTGAAGAAGAACCTGGGCTCAGGCCAGCCGACCGTGGTGTCCCCGGACCAGTACCG
GAGCCGGTTCTGCGCGGCCGCCAGGAAGTACTTCCTGCACGTTCCCCAGCACTGGGACGT
CATACGCACCCAGAACACGGATACGTAATCCGAATTATCGAAACATGTATGCTGTAGTTA
GGACATTTAAAGTCTAGTGAGGCGCCGATCGGCGACATCTATCAGCCGACCGTGGAAACT
TTTTTTTATTGCTTAGATGGGTGGACGAGCTCACAGCACACCTGGTATTAAGTGGTTACT
GGAGCCCATA
(970 bp)

- SilkBase 1999-2023 -