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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29848_c1_g2_i8
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		Single-strand_selective_monofunctional_uracil_DNA_glycosylase_[Operophtera_brumata]
Ontology
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
Transcript
Level		FPKM:3.08 TPM:1.71
ORF EntryO_BomoIG103899_complete:A_BomoIG_DN29848_c1_g2_i8
Sequence
(Nucleotide)
TGTTTAAAATATGTCTTTTTATTGGTAAGTGACAGGAGTAATTTATTGCTTTGCTCGTTT
TATGTGACGAATGATCGTAAGTATTATATAATGTTTTGGAGATTTGTGACTTTATTACAA
AGTGCCATAGTTGTAATTAGTTTGAACTTAAAACTGTTTCAAAACTTTTTTCTCAGTTTG
TTGTAAACCAATGTAGCTATGTATGTATATATTCACGCGGACAGCTTTTGCTTTGATTTT
GTAAGTGTCCATTTATCTAGTTACAATTGTTGATCGGAGCTTTACCCTGTTAGGCAGCTA
CCATAGGCTAACTACTGCACTACCGACCCATTCGACTGAGGATCTATCCATCATTTACCT
GGAATGGACTAATGACAGGAACAGTTAGAATGGTGCCTATCTGTGTGAGCTCAGAAAACT
TCCTATCTTAATTATACATACTTATAGTAATGCTTATGGTAAGCTGTCAGTGGTTTATGT
ATATAAATTGATAATGGGGATTTAAACATAGTACCAACAGTATATCACTTATATTTGTAT
AATCAGTATCAACATGATAAGGATTTATCGTACAAAAATCATATGAGCCTTTTTAATACT
TTTGATAAATAGTGAACTCACAGTAATTACTTGTATTGTGCATGTACATTAAAAAATCAG
ATCATATACACTAAAAAAATTCAGTTTGGCGACTATAGTAATCTCAACTTCAATTAAAAA
AAAAAATTGTTGATAAAACTGAAGTTTTATGTGGACAATCTTTAATAGACTAATATTGTA
TAATTCTCTACGTTTAAATTACACTTTTCTTCACTTTAGGAAGTCTTCGACAATATTTTA
ATTAAATTAAACTTTTTTATCTTTCTTCACTTTTGATTCAGGGGCATTAGGGTTTATCCC
TTTATAAAACTCTTTGAGCAACATCATAGCTTCATCTGCCAACAAGTTTCCATTTAAAAT
ATAATTTTGTTCATAAAAGTTACTGACATCTAAAACGGTATTTCCGCCAAACCTGTCATT
GGGGCAACCATATACCACCTCACGGATGTTTAGATTGTTGAGCGCTGCCGCGCACATTAT
GCACGGTTCAACGGTCACATACACAATTACGTTCTTGAAATATAGCTTGTAATCGATGTT
GTTTAATCTACAGTATTCTAGAATTTGATCAATGCAGTTGATTTCCGCATGTCTAGTTGG
GTTGTGTGTGGCGTTTACACTGTTTTTTGATTCTGCAATAATTTGTCCGTTAACTGTGAA
TACACAACCAACAGGCACCTCTTTAAGAGCCAGAGCTTCAGCTGCTAATTCAAGACACCT
TCTCATATGATCAACCATATTCGACTTAATCTTTTAACGATACAATTTCAAGCAAATCCT
TGATAAAAGTGCAATAAATTGTTTTCTTTTAAACAGTGAAGTGCTTTGTCGTCCCAGTTA
TTATTGTTTACAGCTCTTGGACTTGGATGTGGCATGTATATTACCTGTATTTTATTTCGA
AATGAATACTTGTCCAGAATTTTTTGTGCGCGTAATTCGCAAAATTTTCCGATCGCCACT
ATGATGTGTACATCATAAAGTTCGAGAACTTTTTTGAATATTGGATCACATATGTGATAT
AATGAATCTATTTCTGCGGCCTTGAAATCACCAGGAGTCAAATTGCATCCATTATTCTTC
ATCCATTGTTCTGGTAAATAATTATATACAAAACTAGATTCAAAAAAATTGTTTGGTTCT
CCACATAAATTCTTGAACAATCCCCAGAATCGTTTCCCACTTACTTCAGTTCTTTTACAA
TCAAATCCATTGACTGGTCTAGACTTAATTTCCAGTGGAGGTTTGCCAACAGAGCCATTT
ATACCCAGCCAATCTCTGACTGAAGAAATTTCACCAAATGGAACCTGAAAACAAGTAATC
AAAATTAGAATTTAATTTTTTTACATTACACCTGTTTTGTTACTTTATTATTTGAACAGT
TGCTAAGAACCTGTTAAATTATAGTGTTTACAAGTTTTTTAGAACATTTTGGCATATTTG
AGGTAAGTCTTACTAAAGGCTAAAAGTCTCTTCTAAGTTTGAAACTAAAAATGATAGAAA
TACCTTTAGTGGTGGATATCACATATGGCTAATATCTTGTTATCAGCTTGAAAACAGCTT
ATATTTTGTTAAAATTTACTGGATGAATAAAATAAACACACTTGTCATCAA
(2211 bp)

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