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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29848_c1_g2_i6
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		Single-strand_selective_monofunctional_uracil_DNA_glycosylase_[Operophtera_brumata]
Ontology
GO:0000703 F oxidized pyrimidine nucleobase lesion DNA N-glycosylase activity
GO:0003677 F DNA binding
GO:0004844 F uracil DNA N-glycosylase activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006281 P DNA repair
GO:0006284 P base-excision repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0008152 P metabolic process
GO:0016787 F hydrolase activity
GO:0016798 F hydrolase activity, acting on glycosyl bonds
GO:0017065 F single-strand selective uracil DNA N-glycosylase activity
GO:0019104 F DNA N-glycosylase activity
GO:0031981 C nuclear lumen
Transcript
Level		FPKM:2.92 TPM:1.62
ORF EntryO_BomoIG103897_complete:A_BomoIG_DN29848_c1_g2_i6
Sequence
(Nucleotide)
CGTAACGCTAATAAAATAAGTAATGTATAGATACTAACAAACAAATTCTCAAAACATAAA
AAGTAAACAACTGAACTTTTACTTTTATTCATTTAATAAATTATTTTAGTGTTCAACGCG
ATTCCCTTACCTCCTGTAGTAAATAGAAATCGAAATTTCAAGAAACAAAAATAAATGATG
TTAGTTTTCAAAGCAATAACGGGAAAAATTACTTTATTTGTTGCCTCTTAAGGTTGATCT
AAAGGTTCTAAAGGTATCTATATCTAAGGTCTAAAGGTTATTTAACATATTATTATGTCT
TTTAATTTTTAAGTGACAGGAGTAATTTATTGCTTTGTGACGAATGATCGTAAGTATTAG
ATGTTTTGGAGATTTGTGACTTTATTACCAGGTGCTATAGTCGTAATTACTTTGAACTTA
AAACTGTTTCAAAACTTTTTTCTCAGTTTGTTGTAAACCAATGTAGCTATGTATGTATAT
ATTCACGCGGACAGCTTTTGCTTTGATTTTGTAAGTGTCCATTTATCTAGTTACAATTGT
TGATCGGAGCTTTACCCTGTTAGGCAGCTACCATAGGCTAACTACTGCACTACCGACCCA
TTCGACTGAGGATCTATCCATCATTTACCTGGAATGGACTAATGACAGGAACAGTTAGAA
TGGTGCCTATCTGTGTGAGCTCAGAAAACTTCCTATCTTAATTATACATACTTATAGTAA
TGCTTATGGTAAGCTGTCAGTGGTTTATGTATATAAATTGATAATGGGGATTTAAACATA
GTACCAACAGTATATCACTTATATTTGTATAATCAGTATCAACATGATAAGGATTTATCG
TACAAAAATCATATGAGCCTTTTTAATACTTTTGATAAATAGTGAACTCACAGTAATTAC
TTGTATTGTGCATGTACATTAAAAAATCAGATCATATACACTAAAAAAATTCAGTTTGGC
GACTATAGTAATCTCAACTTCAATTAAAAAAAAAAATTGTTGATAAAACTGAAGTTTTAT
GTGGACAATCTTTAATAGACTAATATTGTATAATTCTCTACGTTTAAATTACACTTTTCT
TCACTTTAGGAAGTCTTCGACAATATTTTAATTAAATTAAACTTTTTTATCTTTCTTCAC
TTTTGATTCAGGGGCATTAGGGTTTATCCCTTTATAAAACTCTTTGAGCAACATCATAGC
TTCATCTGCCAACAAGTTTCCATTTAAAATATAATTTTGTTCATAAAAGTTACTGACATC
TAAAACGGTATTTCCGCCAAACCTGTCATTGGGGCAACCATATACCACCTCACGGATGTT
TAGATTGTTGAGCGCTGCCGCGCACATTATGCACGGTTCAACGGTCACATACACAATTAC
GTTCTTGAAATATAGCTTGTAATCGATGTTGTTTAATCTACAGTATTCTAGAATTTGATC
AATGCAGTTGATTTCCGCATGTCTAGTTGGGTTGTGTGTGGCGTTTACACTGTTTTTTGA
TTCTGCAATAATTTGTCCGTTAACTGTGAATACACAACCAACAGGCACCTCTTTAAGAGC
CAGAGCTTCAGCTGCTAATTCAAGACACCTTCTCATATGATCAACCATATTCGACTTAAT
CTTTTAACGATACAATTTCAAGCAAATCCTTGATAAAAGTGCAATAAATTGTTTTCTTTT
AAACAGTGAAGTGCTTTGTCGTCCCAGTTATTATTGTTTACAGCTCTTGGACTTGGATGT
GGCATGTATATTACCTGTATTTTATTTCGAAATGAATACTTGTCCAGAATTTTTTGTGCG
CGTAATTCGCAAAATTTTCCGATCGCCACTATGATGTGTACATCATAAAGTTCGAGAACT
TTTTTGAATATTGGATCACATATGTGATATAATGAATCTATTTCTGCGGCCTTGAAATCA
CCAGGAGTCAAATTGCATCCATTATTCTTCATCCATTGTTCTGGTAAATAATTATATACA
AAACTAGATTCAAAAAAATTGTTTGGTTCTCCACATAAATTCTTGAACAATCCCCAGAAT
CGTTTCCCACTTACTTCAGTTCTTTTACAATCAAATCCATTGACTGGTCTAGACTTAATT
TCCAGTGGAGGTTTGCCAACAGAGCCATTTATACCCAGCCAATCTCTGACTGAAGAAATT
TCACCAAATGGAACCTGAAAACAAGTAATCAAAATTAGAATTTAATTTTTTTACATTACA
CCTGTTTTGTTACTTTATTATTTGAACAGTTGCTAAGAACCTGTTAAATTATAGTGTTTA
CAAGTTTTTTAGAACATTTTGGCATATTTGAGGTAAGTCTTACTAAAGGCTAAAAGTCTC
TTCTAAGTTTGAAACTAAAAATGATAGAAATACCTTTAGTGGTGGATATCACATATGGCT
AATATCTTGTTATCAGCTTGAAAACAGCTTATATTTTGTTAAAATTTACTGGATGAATAA
AATAAACACACTTGTCATCAA
(2481 bp)

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