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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29837_c0_g1_i5
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		potential_E3_ubiquitin-protein_ligase_ariadne-2_[Bombyx_mori]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0000209 P protein polyubiquitination
GO:0004842 F ubiquitin-protein transferase activity
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0031624 F ubiquitin conjugating enzyme binding
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
Transcript
Level		FPKM:3.54 TPM:1.97
ORF EntryO_BomoIG103135_5prime_partial:A_BomoIG_DN29837_c0_g1_i5
Sequence
(Nucleotide)
CCTACACGACGCTCTTCCGATCTCTTGCAAATACAATTTTGTTCCAAATATTTAAACTTT
ACTACTATTATTTGACTTTGAACTAAATTCTAGAAAATCTTTTAGTAGTGTTGTCCGCCT
TTTTTCTGCTATATCCATTTGATTTTCCAAGTCACCCCTATGGGTTGTTTCAGCCCTTTC
AATCTTCCATGACAAATTCTCTATCTCAGCTTCAAGTTGAGCCTGCTGATATTCAAATAA
TTCTTTTCTAGGACCAACCTCCATGTAGTATGCATAAGGATAGGTATATTGAAGAGTATA
TCTACAGCGCTTGAGAAGTTTAGCAGCATCCCAAAGATATTGCCAATCAATCCATGTACC
TTCCCCAGCCATAACCTTTTCGTTTATTCTGCTTTTAAGACTTTCCAATGTCTGCTCTTC
TAACTTCAGAGATCGAGCATGATTTTCCCATCTTTCATAATAATGCAAATATTTCTTCAA
GGCTTCACGTGCCTGAGCATGTTGGCTATCAGTAGTCAAATTTGGGTCTTCCTTATACCG
ACTACATTCATAGTATTCAGATCCATGAGCTTTCCAATCTCCCAAACAAACCCAACAGAA
ATCATGTCTGCACGATCCGCACTGCATATGATTGCACCCCCCATTTTTCTCAATGCAAAT
TTGACATTTAGGACAATCCTTAGTGTGGGCACTAATATAGTTTGCAGTTTCAGAGTCATC
AGCACATTTGGTTAACCATTGTCGAATTGTAGCACAGTCAGTAGGAGCATGATGAGGAGC
CCCGCATGAGAAGCATGTCAATGATTCACAACCTTTGCATTCAACACGGCGTGCTCCTTC
ACGAATGAATGCTCGAAAAATCCACTGACAGTTAGGACCAGGGCAGAATCTAAGTTGTGG
GTGAGATTTAACATGATCTTTAAACATGAATTGTTGGTATCGGTCCCTTAATGCTGGTTT
AGTAACATGTGACAGAACAAAATCCTCTGGCGCTCTGACCTCACAGTTTTGAGCCATGCA
GCGTATTGTATTTGAGACTCCTTGCATTATTTGAACTTCAAAATGCATTGCCCAACAGTC
GTTGCAAAAATAATGTCCACATGCTAGTGCACTATACTTGTGCAGTTGAGGTGTGCTGGC
ACAAACAGCACAACTTGATCTGCTTGATATACTTTGTGAAGGCACTTGTGGCTTCACCCT
ACTGAAAACCAACACTTCATTTGCATTTTCTTTATATTTGTTAATTATTTCTTGAGCATT
CCATTCATATGCATGTAGTGCTACCTTGGCGAGTGATGGTGTTATCTGAAGGCTGTTACT
AAGTAATTCAATAGATTCGTTGAGTAATTTTTCCACTTCTTCAACTTTCAGACAAGAAAA
CACAAAATACTCAGGATCTGACTTAGTGCGATCGGCTACTTCCATATCACAATCTTCGTG
TTCACCGTAGTAATCATAATCATCGCCGTCATTGTCAGAATATTCCATATCAGACTCCGC
AGACATTTTGTAGTTTGGTTCTTACGATGTTTTTTTACTACGAAATAATGTGTTTTGGTC
TTCTACCTTTAAAAACACTATAACACACTATATATAGTATGTATTCGTATTTGTATCATA
CAAGTACACTCTACGAATTACGAATTGAATTGATCTTCCACTTGTCAAAATGATGAACAA
TACTTTATAAGGAACTAGATACAAACAAACTAATTATTCTCAAGTAGGTACCTGATTTTT
TTTCACAAATAAAATTTTGTGTTAGACCATAAATTAATGATCTAAGGTTTAAAATTAATA
GCGGTTTGACTTCATTATTCTAGATGTTTTAATATTGAAATAGTTATGTACAGTAAAATT
AGGTACTATAAGCATTTCCTGTTTTGTGTAAAACCTATTTTATTTTTGCTAACTGCGATT
TAAAGACTGTAATTACTAGTCTAAGTATATATCCATATAATGTACTTTACTTAACACTGC
GTTTTATATAACAATCGTATTATTTATGATTCTGCGCAAGGAATAACTAGTGTGCTCTGA
ACATAAGCACTCCAGATTTTTGTATTTTGGTATTTGTCCCAATAAGTAAATCAGGTTCTT
CTTTGGTCTGACAACGTTCATGCAAAATGTAATCAACCGGTCCGACCTCCAAATATTAGT
ATAAAAGGGTATCCTGCTGCAAAACGTTGAGCTTGCCAGTGATCTATCGTCAAAACGAAA
TACAATTTTACCATAGGGCTTTGAAGCTTCTAGCCCCTGAAATCTACTACCCTTGGGGAT
CGGAA
(2285 bp)

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