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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29828_c0_g1_i6
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UBR3_[Papilio_polytes]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:6.49 TPM:3.62
ORF EntryO_BomoIG102867_5prime_partial:A_BomoIG_DN29828_c0_g1_i6
Sequence
(Nucleotide)
CGCTCCCTTCCTCTTCTCCCGGACGTAGGCCGTGTAGCGCTCCATGGAGGCGTGGAAGTC
GCGGCGGTGCACGGCGCGGCGCAGCACGTGCAGCGGGTCGTAGTATTGCTCCCACACGAC
GGGGCGCGGCACGAACAGCCCCTGCTCCAGGTTCTCGGAGCCCCGGGGCGGCGGCCGGTA
CGTGGACAGCTCCTTGAGCACGGTCTCGAAGTTCTTGGTGTGCGCGTTCCCGGAGCGCTC
GGGCATGAGCTCCAGCAGCTGCGAGTGCGTCTTGTCGCCGGCGGCCAGCAGCGTGCTCAC
CTCCAGCCGGGACTGCGTGAGCTCGTCGTTGCCCAGGTTGGTCCTGGAGGAGACCAGTAT
CGCCAGGAACGTGAGCAGGCCCTCGACCATGGCGTCCTGCTCGGCCGCCTGCACCGGCGA
CATGGGCAGCATGCTCAACCACTCCCGGACTCCGAACATGTCAATGCACATGTCCATGAA
CTGGTCCGGCGGCAGGTGGGCGGCGCATATCTGCAGCCAGTAGATGTCCATGTCGACCAT
CGAATTGCAGAAGTTCGCCTGGATGTAGGTCATCGCTTGGCCTTTGATCTGGAGGCCGTT
CCTGACCCAAACTCCAGCCAGGATCTCGTAGAATAGACTCTGCACGCGCAGCGGGTGCGC
GGCCAGCAGCGCGAGCAGCGGCACGGGCGGCAGCACGTCGGCGGCGCGCACGCCCATCCA
GCGCACGGCGGCGCACAGGAAGGCGGCGAGGTAGCGGTGCAGCGGGAAGTGGAAGGAGGC
GCGCATGGCGGCGTCGCGCTCGGGGCGCAGCTCGGTGCACTGCACGGCGCCCAGCCACGC
GCGCAGGCTGCCCAGCGCCGCGCCCAGCATGCGGCGCGCCAGCGGGGCGTGCTCGGGCGC
CGTCAGGTGCGACAGCACGGACCACATGGGGTACGCGGCCGCCTCCAGCTCGCACGAGAA
CGCCGCGTAGTACGACGACGGCTCGAACTCGATGTGCCCGCCGGTCTCGCGCACGTTCAC
GTTCATGCCTTGCAGCATGGACAGGAACTCGAACCACATGTCGATGAGCGCGTCGTCCTG
CAGGAACAGCAGCGCGACGCTCTTGTGCGAGAGCACGTTGTTGAAGTCGGACACGAGCGG
CCAGTAGCAGTGCTCCTTCATGACCTTCTGCGTGCAGTCGATGACGCGGTGGTAGTTGCG
GCGGGGGTCGTGCAGCGTGTTCTGGACGAGGATCTTGGCCATCATGAGGCGCAGCGAGAG
CACCATGACGTGCAGCAGGTGCAGGTGCTGCACGCAGCGCAGCGCCAGCGCCTCGTTGGA
GAACAGCTGCACGGACATGTGCACGACGCGGTTGGACAGCGTGTCGGGGTCGGCGGCCGC
CTCCAGCACCAGCGGGATGCGCCCGTAGTGCAGCACGAACGTGCGCGTCAGGTGCTCCTT
GTAGTCCTGGTCGGGTAACATATTCAGCAAGAAGCAGACCACGTTCTGCGGAAACTCGTA
TTTGAAAGTCCAGAATATGAATTCTTCCAACAGCGTGTTGTGCGTCAGTCGAGGCGCGAG
CGCCGGCAGGTGGCAGTACTCGTCAGGCGGCTCCGGTGCTGGGAACAGATCTAACGCCCT
CTCGTACATGTGGTGTGACTCTGCCATGTACGCCCCGTACTCCGTGTCCGGGAATGGTGG
AACCACAAGATTCCTGTACATCTGTGGGTTAATAAGCGCCTTAGTCATGGCCGACCGCAT
GAGGTCACCCATGTTATTGAACTCCATCAACATCTGAACGTAGCCCTCGCACTCTTGAAC
CGCAATACGACACCGGTCTGAATTGGTTTGGCTTCCGCTGCTGTTCTCCCTGAAGTGCTG
GAGCAGCCGTAGTATGAGCCGCGGCATCATCGCTTCAGCAACACACATCAGTTCCGCGGG
AACGGTGCCGGGCCGAGGACATTTATTACCGTGGTTACTGCAGAATCCGTCTTCCTTCAT
GACGGACTTATCACCACAGTCGCAAGCGCCACCGGCCTGCGATAGAAACATGTTGAAGTC
GTGCGTGGAGTGATCGCCTCGGTGGAAGCATTCTCTGCATATCGACATGCAGGGCGATAT
ACCGCACGTCCGACAGCGGTAGGCGACCACGCGCGGTATCCAAACTAGGCCGCACTTGTC
ATGTTTGTCGTAGCTTCGCACGACTGCAGCGAATTCATCTGGTGTTCTACCTCCAGCCAG
CAGCCACCGACACCAGTCAATGGTCTCCCACTCGTCTATAGCCTTGCTAGGGTTCAGCAG
AACGTCTAGAAGTGGCCCCAAGTGCTGTGGTGATCCGCTGGAGCAGTCCGCATGTATGTA
AGCGGCTGCCCCCCTTTTACCCTTCTTCATTAACACTTGAGCCGTTGAATTAGCCATTGT
AACACTTAGACCGCTTCACAAACCAATAGAGATCACATGAAACACATAAGTCACTATTTA
ATTCGGTCACTCAAGGAAGAAAAGCCATTTCAAGTTTTACATAAGGCAATGAACTGTACT
CGGTTACGAAGTCACGGTTCACCATGCTTTCGTTTAAGAAACACTTTAAAGAACGAAAGA
GAAGCGTTTGCGCGACTTAATATGAAATGAAACTGAATGATGAAAGAAAGAAAAATATTA
ATTCCCTTCGTTTGGTTGAAAATATGCAATTCAGAAACAACTCGTTTTACGTCCGTTTGG
T
(2701 bp)

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