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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29828_c0_g1_i2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_UBR3_[Papilio_polytes]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0001701 P in utero embryonic development
GO:0001967 P suckling behavior
GO:0004842 F ubiquitin-protein transferase activity
GO:0005737 C cytoplasm
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0007608 P sensory perception of smell
GO:0008270 F zinc ion binding
GO:0009790 P embryo development
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042048 P olfactory behavior
GO:0046872 F metal ion binding
GO:0061630 F ubiquitin protein ligase activity
GO:0071596 P ubiquitin-dependent protein catabolic process via the N-end rule pathway
Transcript
Level		FPKM:0.54 TPM:0.30
ORF EntryO_BomoIG102863_complete:A_BomoIG_DN29828_c0_g1_i2
Sequence
(Nucleotide)
GGGCTGTGAACTCGTCCACCCATCTAAGCAATAAAAATAAAAACTTCAGTGTTAATAAAA
TTTGGTAAGCTGGTCGAGTGGTATGAGCGCCTCGGTGGGCGGTACCCCTTACTGTATTAC
CACTTTTGAGAAATGTATTTTTTGACAAAGTCATTGGGGATCAACTACGGTACCGACGGT
ATTAATATTTTTAAATAATTATCAACAAAATAAACTCGGTCTTGCGACTCCAAGCTAGGC
ACCTCTGTGCTGTGGGAGGCAGAGATCGATATTTATACGTTTAAATACATACTAAATTAA
TTTGTATTAGGTACCCATGCACAAAAAAAATTTTTTTTTTTATTTGATTTTATTTGATTT
GAAAGCAAGTAAACCTGATGTGGGAACCAAACTCACGAACGCTAACAGCTGCGCCAGTTA
GCTCCTGATGTGGGGACCAAACTCACGAACCTAATAGCTGCGCCAGTCAGCTACTTACCC
AGGTTGGTCCTGGAGGAGACCAGTATCGCCAGGAACGTGAGCAGGCCCTCGACCATGGCG
TCCTGCTCGGCCGCCTGCACCGGCGACATGGGCAGCATGCTCAACCACTCCCGGACTCCG
AACATGTCAATGCACATGTCCATGAACTGGTCCGGCGGCAGGTGGGCGGCGCATATCTGC
AGCCAGTAGATGTCCATGTCGACCATCGAATTGCAGAAGTTCGCCTGGATGTAGGTCATC
GCTTGGCCTTTGATCTGGAGGCCGTTCCTGACCCAAACTCCAGCCAGGATCTCGTAGAAT
AGACTCTGCACGCGCAGCGGGTGCGCGGCCAGCAGCGCGAGCAGCGGCACGGGCGGCAGC
ACGTCGGCGGCGCGCACGCCCATCCAGCGCACGGCGGCGCACAGGAAGGCGGCGAGGTAG
CGGTGCAGCGGGAAGTGGAAGGAGGCGCGCATGGCGGCGTCGCGCTCGGGGCGCAGCTCG
GTGCACTGCACGGCGCCCAGCCACGCGCGCAGGCTGCCCAGCGCCGCGCCCAGCATGCGG
CGCGCCAGCGGGGCGTGCTCGGGCGCCGTCAGGTGCGACAGCACGGACCACATGGGGTAC
GCGGCCGCCTCCAGCTCGCACGAGAACGCCGCGTAGTACGACGACGGCTCGAACTCGATG
TGCCCGCCGGTCTCGCGCACGTTCACGTTCATGCCTTGCAGCATGGACAGGAACTCGAAC
CACATGTCGATGAGCGCGTCGTCCTGCAGGAACAGCAGCGCGACGCTCTTGTGCGAGAGC
ACGTTGTTGAAGTCGGACACGAGCGGCCAGTAGCAGTGCTCCTTCATGACCTTCTGCGTG
CAGTCGATGACGCGGTGGTAGTTGCGGCGGGGGTCGTGCAGCGTGTTCTGGACGAGGATC
TTGGCCATCATGAGGCGCAGCGAGAGCACCATGACGTGCAGCAGGTGCAGGTGCTGCACG
CAGCGCAGCGCCAGCGCCTCGTTGGAGAACAGCTGCACGGACATGTGCACGACGCGGTTG
GACAGCGTGTCGGGGTCGGCGGCCGCCTCCAGCACCAGCGGGATGCGCCCGTAGTGCAGC
ACGAACGTGCGCGTCAGGTGCTCCTTGTAGTCCTGGTCGGGTAACATATTCAGCAAGAAG
CAGACCACGTTCTGCGGAAACTCGTATTTGAAAGTCCAGAATATGAATTCTTCCAACAGC
GTGTTGTGCGTCAGTCGAGGCGCGAGCGCCGGCAGGTGGCAGTACTCGTCAGGCGGCTCC
GGTGCTGGGAACAGATCTAACGCCCTCTCGTACATGTGGTGTGACTCTGCCATGTACGCC
CCGTACTCCGTGTCCGGGAATGGTGGAACCACAAGATTCCTGTACATCTGTGGGTTAATA
AGCGCCTTAGTCATGGCCGACCGCATGAGGTCACCCATGTTATTGAACTCCATCAACATC
TGAACGTAGCCCTCGCACTCTTGAACCGCAATACGACACCGGTCTGAATTGGTTTGGCTT
CCGCTGCTGTTCTCCCTGAAGTGCTGGAGCAGCCGTAGTATGAGCCGCGGCATCATCGCT
TCAGCAACACACATCAGTTCCGCGGGAACGGTGCCGGGCCGAGGACATTTATTACCGTGG
TTACTGCAGAATCCGTCTTCCTTCATGACGGACTTATCACCACAGTCGCAAGCGCCACCG
GCCTGCGATAGAAACATGTTGAAGTCGTGCGTGGAGTGATCGCCTCGGTGGAAGCATTCT
CTGCATATCGACATGCAGGGCGATATACCGCACGTCCGACAGCGGTAGGCGACCACGCGC
GGTATCCAAACTAGGCCGCACTTGTCATGTTTGTCGTAGCTTCGCACGACTGCAGCGAAT
TCATCTGGTGTTCTACCTCCAGCCAGCAGCCACCGACACCAGTCAATGGTCTCCCACTCG
TCTATAGCCTTGCTAGGGTTCAGCAGAACGTCTAGAAGTGGCCCCAAGTGCTGTGGTGAT
CCGCTGGAGCAGTCCGCATGTATGTAAGCGGCTGCCCCCCTTTTACCCTTCTTCATTAAC
ACTTGAGCCGTTGAATTAGCCATTGTAACACTTAGACCGCTTCACAAACCAATAGAGATC
ACATGAAACACATAAGTCACTATTTAATTCGGTCACTCAAGGAAGAAAAGCCATTTCAAG
TTTTACATAAGGCAATGAACTGTACTCGGTTACGAAGTCACGGTTCACCATGCTTTCGTT
TAAGAAACACTTTAAAGAACGAAAGAGAAGCGTTTGCGCGACTTAATATGAAATGAAACT
GAATGATGAAAGAAAGAAAAATATTAATTCCCTTCGTTTGGTTGAAAATATGCAATTCAG
AAACAACTCGTTTTACGTCCGTTTGGT
(2847 bp)

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