SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29820_c4_g8_i1
Scaffold_idBomo_Chr11
NCBI non-redundant
(nr)		U3_small_nucleolar_RNA-associated_protein_6_homolog_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0006396 P RNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
Transcript
Level		FPKM:0.10 TPM:0.06
ORF EntryO_BomoIG104053_3prime_partial:A_BomoIG_DN29820_c4_g8_i1
Sequence
(Nucleotide)
CCTGATTCAATGTTAACTAATAGAATATTATACAACTGCAAGGCATCACCAGTATTCAAA
GACTTTGTTGCATTTTGTAGTATTACTAAAAGTTGTTTCTCATCGTCTTTTTTATGAAGT
AACAACTGTTCCCAGACACTCTTTAGTTTGGGATTTCTCTTTATTGCTGCATTTAAGATC
TCTAATAGTTCATCAGTAGTTGTCTCATTCTCCAGTTTCAACATTTCAATGCCAAACGCA
TACATGTCATTGCTGAGAAGACCATTGTCATGACCGTACATCCAAGCATGTTTTACAGCT
TTGATTTTTTGTTGATCGGAACATATATCTTCACTCATACCAAGCAAATCATGGATGAAA
CGTGTGCATAAATTTTCGTCCATAAACAATTGCAGTGCTTCTTCGTAAATACCTATTACA
TAACCAACAACTTTAGGAAAATTATGTTCATCATCAGCAAATTCCTCTATTTCCTTCCAA
TGAAAACCTTCCAGTTCCTTCAATGCAAGATAAGGCCAAACTTCTTGGTTATTACGATTT
GACCATATTTCAAGTTTTATATCGTCCACTAATCCACCGGTATATTCATACTTGGTACAC
AAGTCATACAATTTGAATAGAAACTTCACATTTTGGATATTCTTTGCTCCGTTTCTCCAG
ATTATATCAGCCTTCTTTTGCAGTTTCTCCTTTTCTTCGTCAGTCTCCGCCTTAAAGCAC
AAATCAATTAGCTCAATGTTGAACAATTCAAGGTACAATGGCTCAGCATCAGGGTTTCTT
TGAATTCCCTTTAAAAGAAAGGCCTTTGCATTTTCTAGATTGTTCTGTTCTAAACTCTCC
CATTTGCTCGCCATCAACCACATTTGAGGTTTATCACCATGTATCTGCAACATTTGTCCG
ATGATACCTGAGATAGCCTGTTGAAACCCCACACCCTTACAGAATTTTATATACTCAAAA
TATATTTCAATTTCATTTTGGAACTTATAAATAAAGCGCTTGAAAAGTTGGTTCAAACGT
TGAGCAATGGCATACTCCAAATCCTTTTTCTTCTCTGTTAGTTGTATTTTTTTTCTACGC
GTTGTTATATCCTCAAGTAAGGCAAGTTCATAAGCGATGTATTGAACATAATCTTCTTTT
TGTTTGACTCTCCTTTGTATGTGATATTCAAACTCTTTTCGTTTTTGGGATATTTCTCTG
AAATTTTTGTAACGAATGTATTACATGCG
(1229 bp)

- SilkBase 1999-2023 -