SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29820_c4_g7_i1
Scaffold_idBomo_Chr13
NCBI non-redundant
(nr)		glycosyl-phosphatidyl-inositol-anchored_protein_[Bombyx_mori]
Ontology
GO:0000932 C P-body
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0010494 C cytoplasmic stress granule
GO:0017148 P negative regulation of translation
GO:0030154 P cell differentiation
GO:0030425 C dendrite
GO:0042995 C cell projection
GO:0050775 P positive regulation of dendrite morphogenesis
GO:0061003 P positive regulation of dendritic spine morphogenesis
Transcript
Level		FPKM:47.69 TPM:26.55
ORF EntryO_BomoIG104051_complete:A_BomoIG_DN29820_c4_g7_i1
Sequence
(Nucleotide)
TTTTTTTTTTTTAAGATTTTACACAATACTTTTAATTTTCTTGCACACAGCTTCTATTGG
AAACATTTCAAATAAAAATAAAAAAAGAATAGAAATTAGCTTTTTTTATGTTCACTGGTA
TTACATGCTGATAGTTTTCATAAAAAAAGGAAAATAGAGAACGAATATTATAATCTAATG
AAATTAAGATTAGTTTAGGCATATTTTGGATAATTTATATGAGATAAAAACGATATTTGG
AAATATTAGCAATTTGGAGTTGTGTGCACAGTTCCTGTACTTAAAATTATCACGAGGATG
AGGCACACACGAGGTATTTGACGCCTAAAAGGCTTTTCTTGCATTACCTCGAATCACGAC
ACTTACGTGACACAATTTATATTACAAGAATCTAGAATTACGTAACTTAATAATCGCATA
TTATTATTATTAATTATTATACATCTAAATTCAAGTAAACTTATTTTTATTTAGTTTCAA
GTTTTAACATTTTTCTTTTTTTTTTATTAATTTTTTATTGTTTTTTTAACATAATCTCTC
GTTATTTGTTACCACAGCGCGTTGTTGCCGGTGAAATCTGCCTTCACTAATGATTTAGTC
CATCAGAATTTCGAAGACGATTATTGATTGAGCCATAAAATGTGGCATACCAATGCATTG
GTGTGTTCACTTAACTATTCAGCATTATCGGATCTCCTTGTGTAGTGTTGAGCGCGGGGA
GGCCGAGACGCACCGCGTGTTGCTCCTCGAGGAGCTCCTCTACCGCGTCCCTTGTATCCT
CCCTGGAAGCCGTTGCCTTCTCCATACCGCTCACGACCGTTCTCGGCGTGATGTGCACCT
TCTGACACGTCACCGTTGCCATAATATCCGTCGCCACCGGTACGGTTCGCATGCCTATTT
TGGTAGCCGTCATATTGTCTGTTTTGAAATCCTTCCCTGTTCGATCTGTTTTGGTAATCA
CCACCTTGTCGGCCCCGATAGCCGTCACCGCCTTGACGATTAGGGAAAGCGCCTCGGCCG
CGATGACCGTTCGGTGCGCCTCGGCCGCCGCGACCGAAACGTCTGTATCGACTCTGGGAG
TCTCCCTTACGGTCGCCACCGTTCTCTAACTCTGGACTCGGTCCATCTTTTCTGCAATCG
TCTTCTTTATCGGTCACGGGCGAAACCGGCGAAGTATCTTCTTGCAGAACGGGCGTAACA
GAGGCGTGTACCAGAGTCGCGACGAGAGCGGGTTGCATTGTGTGATGTACGGGCTGAGGT
GGAGGGGCGGCGTGCGTGACAGGCGGCAGCGGGGGCGGTAGATTGGCGGGCAGAGGACCG
TGCGGGTGCGTAGGTACGGGCGGCATGGGCACGGGTGCCGGTGCAAACCCTGCATGCTCT
GGATGCGGTGGAAAATGAGGCTGAGGCGGCATGGGCATGCTGCCAGGTTCCGGGACTCTA
CCCCCGGGTAATTGTACATAATGTTGATTGGTAAAAGTCTGAGTTGGGATAGGTCCAGGT
GGCGATACTTGATTAGGAATCGCGGGCGGTTGTGGTGTGCCTACCGGACTGTCAATTTCA
GACTCTTGTAAAAAGAAAAAGTTTTGAGAGCCTATAACTTCTGTGATGGGTCTTTGTTGA
GGATACTGTTGTGCAAAGTAGGCATGTTCTACTTCTTGTAACGTTATCGGCGGCAATGGA
CGTAGAGGATAACCAGGTGCAGGAACAACTGCCGGTGCAGGAGGTACAGGCAGAGGGCCA
GTAGGTGGAAATGCAGGACCAACTGGCATATCTACTTCTGGTTCATGTTCACCTTGTTCA
TGCACCTCTTCTTCTACTGGAACATGACTTTCTTCTACTTCTGCGATTGCACCATCTACA
GTTTTATCAAAGTATCCACATTCATGAACTGTTGATACAATCTCCTTAATTCGTAGGTAT
GTGGTGCCTAACACTTCTTTAGGTTTTCCATCAATTATGGAGTAGAGGTGTTCTGCAGCT
CTTGTTATTTGAAGGTGAAAACCAGATTGTCCTTCTTCATTTAATTCATGCTTAGGGGTC
ACCTCAGGGTATAAATCATCCAAAATTTTTAAATCATCCTCAGTTAATTTAGCAGCACCA
TTTGTTCCATTTATGAAATCAGTCCTTGCATCTGCACTACCCATTTGCATAAGGCAATCC
AGAATAAGTAAAACTTCTTTTATTTTGTTGGTCTCTGCTGCATAACGAACCCAGGCTTCC
TTTTTAGCTTGTTTTTTTGCCTCACGCTCTGAAGAGATTGCTATAGCAGTAACTTGCTTT
GAGAGATCTCTTGCAAATTCAAGGGTTTGGGCAACTTCATCATATTTAGCAACTGCAACT
TTTTGATCAGAATTTAGCTCTTTTCCAGCTTTCTGCAGGTCACGATATGATGTTAGTTTA
CTCTTGCGTTTTTCCAAATTACGAATTTTATGCTCAATAATCGTCATAATTTGTCGAATT
GGTGTATCCTTATCCTCCGAAGAGGCCGGCTTTTCAGATTTTGCATTAGCAGCTGAAGGC
ATCCTTCACAGGCAACAACTTTTCTTGGATTGCGTCGTGGGTTAGAAGATAGAGATAGAA
ATTTCTATCTGTCACTCCCAGCAA
(2604 bp)

- SilkBase 1999-2023 -