SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29810_c0_g1_i3
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		valine--tRNA_ligase_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0002161 F aminoacyl-tRNA editing activity
GO:0004812 F aminoacyl-tRNA ligase activity
GO:0004832 F valine-tRNA ligase activity
GO:0005524 F ATP binding
GO:0005739 C mitochondrion
GO:0005829 C cytosol
GO:0006412 P translation
GO:0006418 P tRNA aminoacylation for protein translation
GO:0006438 P valyl-tRNA aminoacylation
GO:0006450 P regulation of translational fidelity
GO:0016874 F ligase activity
Transcript
Level		FPKM:0.13 TPM:0.07
ORF EntryO_BomoIG103283_complete:A_BomoIG_DN29810_c0_g1_i3
Sequence
(Nucleotide)
GCCTCTGTAATTCCTTGAGTTCTTTCCTTTTGGCCATCAATTTTTCGTGATCGCGGACTT
GCGTCCATTCCGGTATTGTCGTTAAATAATTACTATTCGAATATTTTTCCTCCATATTAT
TCAAAGAGTCTTCTAATTTCTTTATTCGTTTCTCCAATTTATTTTTCGCATTTGTTATAG
CATTCTCTATATCGTCCCCGACTAATTCCACGTATATTTCTGTATTCAAATCCAGGATTC
CTTTGACGTAAGTTTTGTCATCTTTACCATTGAATGTTAAACCTTTCGCGCGTGTCAGAT
GTGTTATAATATCAACATTATCTTTCATAGCTTCTATTAGATTTTCATTATCCGTTCTCA
CATTAATTATAGGTCGAACTTTATTCGTAATACTGTATAGACCTTTCAATTCGCGTATTA
AGTTAACCGCGTTCAATATCTTTTCGGCTTGCTCTTCAATAATTTCGTTTTTCCATTCCA
CGTAATCTTCAGTTTTTGGAAATGATAGAAATTTTTCGGATGCGTCTTTGAAATTTATTA
TTACATTCCTTTCGAAATCCGGTATCGTTGGTATTAATTCTTGTGTTATGTAAACCATGA
AGGGGTATAAACACCTCAGAGACGTGTTCAAGACTGCGGACAACGTGTGCGCGTGAGCGT
AGCCGATTCTAACATTATCATTCTCGAATCCCGGTTTCGACGCCTCCAAATAAATATCGC
AAAACTCATTGTAAATCAATGTTCTGATAGCTTTCGTTGCCACTTGGAAATCATATGAAT
CCATTGTATCGTTGACTTTTTGGACCATATTGGCCAATCTACTCAGAATCCATCTATCAA
AAAAAGTCAAATCCTGTTTGGTTATTTCAGAATCTATCACTTTCAATTTAGCGTACGACA
ACTGAGTGTATTTGATACTTTGCCATATCTTATTACAAAATAATTTGTTCGAGTGACAAT
AGCTGACATCAAAATTGACGAAATGCGATTTTATGTCTTGCGACAGTAATGTGAACCTTA
ACGCGTCTACCCCGCATTCTGGGATGCCATTAGTAGCTGAAAAATTAGCTTTGTGATACG
AATATGCTTTTTTAAGTTCATCCTTATTGAGAATACCACTTTTGTGCATCTCCTCGCTTT
TCTTTTTGAGGGCGTCAAGGCTTATCCCCTCGATTACGTCAATGGGGTCTATGACGTTTC
CGCGGCTTTTAGACATTTTAGCGCCTTTATTGTCGCAAACAATACCGTGCAACAGAACTT
TTTCGAACGGAACTTTGCCTGTTAATTCAAGGCCTAATATCACCATTCTGTGCACCCAAA
ACCCAAGGATGTCGTGACCCGTAGCTAACAGACTTAAAGGGTAGAATTCCGTATAGTCTC
TACTAAAATCATGATCAGGCCAGCCTAAAGCTGCGAAAGGATAAATTCCCGATGAGAACC
AGGTGTCTAAGACATCTGTATCTCTTTCTACTTTAATCAAATCAGGTAAAGTATTAAAAT
GTTTAGAAGCCTGCTGTTTGGCAGAGCTTTCATCGGTAGCAGCTACCCAAGTCAGCTCTT
CATCAACACTGCACATATAAGCTGGTATTTGATGTCCCCACCATAGCTGTCGCGAAATGC
ACCAATCTCTACCATCATCGGTCCAATTAAACCAATTTTGAATGAAATTTTCGGGTATTA
TTTTCAATTTACGATTTTCAACACACTCTCTGGCCTTTTTATTCAATTCGGCGCAAGATA
AGAACCATTGTTCTTTAGGTAAATGATCAATTACGTTTCCTGATCGACTGCATATCGGTA
ATGTCATTATATGTGGTTTAATCTCTTTCATGAGACCTAAATCATCTAGTTTGTGAACTA
ATATGGACCTACAGTCATAGCGTTTGAGTCCTTGAAATATTTCCGTGTTTTCTATCAATC
CTTCCACATTTATAACTTGGAGTAAAGGCAAATTGTGTTGTTTAGCAACTTCATAATCTA
CTTTACTATGTGCGGGTGTGATTTTGACAGCCCCTGTACCAAATTCCCGATCAACGAATT
TATCGAATATAATTGGTATTGTTTCATTCGTTCTGAATGGATGTATAACCCTTTTACCTT
CCAAATGTTGGTATCAAAACTCAATCACCTTTTGTCTTCTGGATGTACAGCTACTGCTAC
ATCTCCCAGCATCGTCTCTGGCATTGTTGTAGACACAATTATTTCCTCAGTGCTGTCATA
AACTTTATACGCAAAATCATATATCAATCCAAACCTAACAGGCTTTATATAATTTGGCAG
ACTCAAATCACTAGGTTCATTTATTGGTACATTTTCCACTTCAATATCTGACACAGTTGA
TTTTAATGCATTGCACCAATTAACTAGTGCTTTTTTTCTATAAATAAGATTTTTATGGAA
TAATTGAATGAATGCTGTGTTCACGGCCTTGGTGTGTTTAGGATCCATTGTAAAAACTTG
TCGGGACCAGTCAAGTGAACAGCCCAAGGTTCGAAGCTGTTCTGTAATACTATCTCCATG
TTTCTCCCGCCATTTCCATACCTCTTCTACAAATTTTTCACGTCCAATGTCGTAGCGATT
TATGTTTTCTTTACTTTTTAAGTATTTTTCAACAATGCTCTGTGTAGCGATTCCTGCATG
ATCCGTTCCAGGGAGCCATAAGACATTATAGCCTAATGATCTTTTTCTCCTAACTATTAC
GTCTTGTATCGTGCATGCTAATGCATGACCTAAATGCAATTTCCCTGTTACGTTAGGCGG
CGGTAATATTATACTAAAATTATTCTTGTTACTACAATTTTCGGCTTCGAACAATCCTGC
ATTTTCCCATTTATCATATTTGTTTTTTTCAACAATTTCTGGTCTGTATGCAGCGGCGGG
TAAATTTTCTTTAACCAAAATATTTGTCGTAGATGTCGCTAATCTTTTACATGAATACAC
GCATGATTTTTTATTTATTTTATATAGAATAAACATGGTATTCATTTATTTTTTATGTAC
ATTTATTATTTTACAATCAAGTGTTCCTGCAGACAAGTGTTTAACCTATGCTGCAAATCC
TGATGTTTTGACAATTTTG
(3079 bp)

- SilkBase 1999-2023 -