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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29803_c7_g1_i8
Scaffold_idBomo_Scaf017
NCBI non-redundant
(nr)		lipopolysaccharide-induced_tumor_necrosis_factor-alpha_factor_homolog_[Bombyx_mori]
Ontology
GO:0001817 P regulation of cytokine production
GO:0004871 F obsolete signal transducer activity
GO:0005515 F protein binding
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0005764 C lysosome
GO:0005765 C lysosomal membrane
GO:0005794 C Golgi apparatus
GO:0005886 C plasma membrane
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006915 P apoptotic process
GO:0007165 P signal transduction
GO:0007568 P aging
GO:0016020 C membrane
GO:0032496 P response to lipopolysaccharide
GO:0042347 P negative regulation of NIK/NF-kappaB signaling
GO:0043123 P positive regulation of I-kappaB kinase/NF-kappaB signaling
GO:0043231 C intracellular membrane-bounded organelle
GO:0050699 F WW domain binding
GO:0071222 P cellular response to lipopolysaccharide
Transcript
Level		FPKM:5.23 TPM:2.91
ORF EntryO_BomoIG102565_5prime_partial:A_BomoIG_DN29803_c7_g1_i8
Sequence
(Nucleotide)
GCTCTTCCGATCTGGGGATCGTCGGACGCGGACGTACGGAATTGTGTTCGTGCCGACATT
ATATATTGCGTGTCGTGAAATAACAACTAAAATGGCTAACTTTGAACATAAAGGAAATCT
GTCTGGCGCGAACTATGGGCCTCCTCCACAAAATCCGCCTCCTTACAACTATCAGCCCCA
GCAAGTTCCATATGCTAATGTTCCTATCGTCCCCGTCGTGGCTCCTCAACAATTCGTGAC
GGTTGTGCAAGCGCGACCAATGGGCCCTGAACCATCAAGTTTAACCTGCCCCTCCTGTAC
CGCGGTCATCGTAACTAGGGTTCAACACGATGCTTCGAGCAAGACTCATCTTTTTGCGTT
AATCCTTTGTTTGATAGGATGCTGGCCATGTGCTTGCATCCCTTACTGCATGGAAAGCTG
TCAAAATGCTACTCATTACTGTCCGAATTGCAACGCCTACATTGGAACCTATACAAATTG
ATGAGTTTGTGATAAATGCAAATAAAAAAAAAAAACATTATTTCAGTTGGGCGTACATAT
ATCTCTCTTCAACTGTTTATTCTCTTGTGAACTTTATATTAAATATGTCACAATATATCC
TTCCCCAATTTGAAAAAAATCATTAGATATTGTGGTCAAGAACATTTTATTTATGTTTTG
TTATATTTATAATAAACTATTTTGCGACAAATTTTCCAATATTGGGATGAGTTATTATAG
CACAAATATGTATAAAAAAAGACCTATACAGCCATAATTAAATTGTAAAGATTTAATCTC
GGTTTTTTTAAATTGTGTATATATTATTTGTGACGTTTTAAATACTTTACAGCTTTCCCG
GTCACAGATGATTAAGGTGAATTATTCATCGACTGGAATATTGTTTTACTACTGGCCTAC
TGCCAGTTATACTGCCTACCTATAGCTATACTACTAATGGTACCTCAACTAATGGTGTCT
CATATCATTTTGATTAATTAATAAATGATGCTAGGACATGTCCTTCTTCAAACGAGGCTT
GTGGAGAGTAAAAAAGGCAGCGGCTTGGCTTTGGCCTTGGGATTGCCGACGTCCATTAGC
GACGGTAATCACTCACCATCAGACCGTATGCTCGTCTGCCTACACGGACAATAAAAAAGT
TACAAAGTTATTTGAACTAGAGGTCCCGCAGTAGTCGAAATTCGACTATAAATAATTGTA
ACTGTAAGTTTGTACACTATTATGATTGTATTTTATACTTCTATAACCACAAATTTCGCT
AAGACTACACTATAAAAAATATTAACAAAGGCAAACAATATTTAATTTATTCTCAATTTG
ACAACAG
(1327 bp)

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