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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29694_c0_g1_i6
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		RNA_binding_region_containing_protein_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003723 F RNA binding
GO:0003729 F mRNA binding
GO:0003730 F mRNA 3'-UTR binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0006397 P mRNA processing
GO:0006977 P DNA damage response, signal transduction by p53 class mediator resulting in cell cycle arrest
GO:0006978 P DNA damage response, signal transduction by p53 class mediator resulting in transcription of p21 class mediator
GO:0007049 P cell cycle
GO:0007050 P regulation of cell cycle
GO:0008285 P negative regulation of cell population proliferation
GO:0008380 P RNA splicing
GO:0010830 P regulation of myotube differentiation
GO:0030154 P cell differentiation
GO:0043484 P regulation of RNA splicing
GO:0044822 F RNA binding
GO:0070935 P 3'-UTR-mediated mRNA stabilization
Transcript
Level		FPKM:51.12 TPM:28.47
ORF EntryO_BomoIG13928_5prime_partial:A_BomoIG_DN29694_c0_g1_i6
Sequence
(Nucleotide)
GTCGTGCATCGTACATCAGTCCGCGCTCAACTACCACGCCGGTCACCCGCCAATACGCAC
TTCAGTGTTTACAAGTGAACTCGCGTGGGTAATAAACTCAAAGACCGCGTTCGCGGTTGT
GATAGTGTTTCAAGAGTGTAAAGGTGGCCGGCGCAACGGAGGCGGTGCAAGGCATGTTGA
TGGCGGGCGCTCTGCCGGCCGAGTCCGATGGACTTCTGGCTTTGGGCGCATTGCCGGGCC
AGAAAGATACCACCTGGACCAAACTTTTCGTCGGTGGACTGCCGTACCACACAACCGACA
AAAGCCTTCGGGAACATTTTGCGGTTTACGGCGACATCGAAGAAGCCGTCGTCATTACAG
ACAGACAAACCAACAAGAGCAGAGGATATGGCTTTGTGATAATGGGTGATAGGACTGCAG
CGGAGAGAGCGTGTAAAGATCCGAATCCCATCATAGATGGTAGGAAGGCCAACGTTAACC
TCGCTATTCTTGGAGCTAAACCTAGAGGGAATCTCGCACCAGGGTTTGGCTTGGCCGCTG
CCGCGGCTGCAGGAGTGAGGGCAGGCTATCCGACAGTGCTACCGGCGCACTATGGGTTGT
CTCCTGGATATGTGTACGGAACTCCGAGTTACATGGGCGCAATGAGTGGCGTCGGTGGTG
GTGTTGGTGCCGGCGCCGGGGGGCTGGTACAATTGCCTCAGCTCCAACACGCTGCGGCAG
TCGCGGCTGCCAACCACCTATACGAATACCAAGCTGCCGCAGCCCAGGGCGCAGCTGCGT
ACCAACAGCAATACGCTGCAGCAGGATTTGATCCTTACGCCACTGCTGCAGCAGCGGCCG
CTGCAGCCACAGGCGCTGGTTACGTCTCGCCATACTATGCGCTGCCCGGGGGAGGAGTCC
AGGGACCGCTACTTCCACCATTGCCGTATCCTCCTCAACTGCAGGAGGCGAGGATGCAGT
AGAAAGTTTTTAATTATTAACCCGAGCTACGTTTGTGATATACAAAATTCAGATTACAAG
GATTTTAAAGAAAGGTTAAGTAGAAAATTTTGAGTAACAAGTATTCTGACATTCGTTATT
GAAAAAGATAATTATTTAGTAAAAAACATTGATTTTATGTAAATGAAAACATTTAAGTTT
ACTTATAATCGGGAAATAAGTTCCGCCTTAGATTGACACATACGAGGAATACTATGAAAA
ATCACAAATGTAGCTTGCGATTCTAAAATTGATTTATTAATATAGAAATTTAAGTACTTA
CTAGAATCGAATCTTCTAGATTCTGTTAACATGCAGCAGTACGAGGCCAAATTGAAGTTT
AGACAAGAATAGGGAAGACATAGTTTCTATCTATTTAACCAAATGAACGCTAATCATGAC
CAAAGCTATAAGCTTTTATTTAGAAGTTAGAAAGTATTTGGGTACACCGGCCAGTATAGT
GATGTAATAGTAATAATAGTTATTATTTTACTAAAGTAATAATATTACGTAACTGATATA
TTGAAGATCGGTTTAATAGGATTACTTATGTAATCACCAGCGACTGAAGCTGGTGTACAA
TGATCTTACGCGTCTACGCAGTATCTAATAACCAACATTTTGACATAATAAAACCGACTT
CAAAACAATAAGATGACAATTTCATTAATGTATGTAATTGAAGTCAATGTAATGTGCATT
ATTAAGGATAACTCAAAAACTACCAGTCAGACCTTGATTCAATTTAAATGGGACCACACG
GTAAGCACCGGC
(1752 bp)

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