SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29672_c0_g1_i11
Scaffold_idBomo_Chr5
NCBI non-redundant
(nr)		guanine_nucleotide_exchange_factor_DBS_isoform_X4_[Bombyx_mori]
Ontology
GO:0005085 F guanyl-nucleotide exchange factor activity
GO:0005089 F guanyl-nucleotide exchange factor activity
GO:0005515 F protein binding
GO:0005737 C cytoplasm
GO:0005829 C cytosol
GO:0005856 C cytoskeleton
GO:0016020 C membrane
GO:0016358 P dendrite development
GO:0035023 P regulation of Rho protein signal transduction
GO:0035556 P intracellular signal transduction
GO:0043065 P positive regulation of apoptotic process
GO:0043547 P positive regulation of GTPase activity
GO:0051056 P regulation of small GTPase mediated signal transduction
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:0.07 TPM:0.04
ORF EntryO_BomoIG13617_complete:A_BomoIG_DN29672_c0_g1_i11
Sequence
(Nucleotide)
CCTACCCGCGCGGACTCACAAGAGGTCCTACCACCAGTAAAAAATATGGTAATAAAATAA
AATGATATAAATAATATGAACCTAGAATGTGGTAATAAAATAAAATAGAAACAAAGTAAT
TGAACAAATTCTGTGTATTTTATGTTGTTTCAATCTACACATTTTAAAACTAATTTCTGA
TAAACAAACATGTCACTACGTGTATGAACATAGATATAGCTAAAGTCATGCACAATCGTG
GATTTAAATAATAATTAATAATGAGATATGAGAATTCAAGGTCAATTACATCAGACATCG
TACGTACAAATGCATCACAGATAAGATATTGTTATTCGAAAGTAAAAATCATGCTTATAG
CTTTTTAATTTTTAAACAATAAACGAACAATTTTAACGATTAATAAAGCAATATTGACAA
AAACGTATGATATGAAATGATTAAATGATTACTTGCTACCACAGGCTTTGCTACAATATT
AAAAGACAATTATCGAGGCACCATACAAACTCAATGTCTCGTACTACTTACTACTATGAA
TTAAAAAAAAAAAACTTCATGGACGTAAAAAACACAATTATAAAATGGATTGATGTATTG
AAAACGTTTTATATTCAATAACATTATAGATATTCTCACGAAAATATCACACGGGACGTT
AATAATTAATTATAAATGTTTGAAATCGATTCTCGTTCACATAATCTGTCATGGAGTATC
GAGACGTTACACGAAACAACACCGAAAGCCATCAAAATAAATAACTAAAATTAATTTTAA
TGTCGATTTGATATATACAAAAATGACGAGACCGATTCGGTCCCACGGTCCTACGCGACG
CCATTAAAACACAACTTTGGATAATCGTAACGACTATGGCTAAAAGGGCTAAAACACTAG
TTTACAATAAAGCTTTTTTAGAACAACATTTACACACATTAACAAATTGCTTGACGATAA
ACATTAACAAGTGGGATGGGACTACGTCGGGAAAACAAGTCTCATTGTGATTCGGGCGTA
ACCAGGAAATTCTAGGGAGTAACTAATCTCCCGCCACTACTGAGAAGTAGTCGCTCGAGA
TGAACAAGCTTGAGCAAAACTTGATCTCACCGAAAAATCCTGGCAACACCGTCTACTGTC
CTACAAAATTAACGCTAGACATTGGATATTGCTAAATAAGTTTCATACTAAATGGTGGTG
AATTACATTTTAGATCTCAAGTAATACTGAAAGCAGAGATGAATACCAATATCATATAGT
TAGCAGCTATAAACCAATTAAATACCTAGGTTAGTCTTTTTTGACAGTGACATTTTTGGT
ACTTATTATAGAGTAACAAGGACAGGTAGTGTAGTCGGTAACGCAAGGTGTGGTGGTTCA
ATGCTCGTGAAGGCGGTCGTGCGACCTGCTGGAGGAGCGCGACGTCTTGCGCTGGTCGAG
GTAGGCAGCCGGAGCCCAGCCCTCGCCTTGTCCGCCTGCAAGCCGCACGTACCACCAGCC
GGCACAGCCGACTTTGAGTAGTTCAGCGTGTTGTCCCTCTCGCAGCGACACTTCGCTCGG
TCCCACGGCTGTGTAGTCGGACAGCGCCACCAGTCCACATCCCACCGCACGATAGTTAAT
GTTCAGCGAATAGAACCGAAATATCCACGTTCTCTTTGGTTACCGCACTAAGCTTTGGAC
ATAAACTCAGTCTGTTTCATTATATACAAGACCTCTACTTCGCGTAAAGGTATTTAACTT
TCAGTATTGGGATACGTAAAACGTGGAGGTGGCTTGCGCAGAGCCCGATACCGAAAAGAA
CTGTACCACTCTGTGGATGGTACCGTTGAGACCGACGGCCTCCGTCACCGGTGCGTGTTC
GACGTCGTCGTCGTCGTCGTCGGAGGGGTCCGTGGACCAGCAGGGCTCGTCGTGCGCGTC
GCACGAGCCGGTGCGGGGCGCGGTGGGGGGTTGGGGGCGGGGCTGCGCGCCCGACACCTC
CCACGAGCTCGTCTGGATTAGTGTTCTGTGATGCTGCAGTCCGTACTGCCGAACTCGCTC
GCCCTTGAGTTCCTTCAGCTGGTCGAGCAGCACCCGTTTGATCCGCTCGACCCAGGCGCG
CTTCACCTCGACCGTGGGCGCCGTGATCGTGTGCACCTCACACCTGCCCTGGCGCCACAC
CTCGAACTTGCGGAGATCGCCCTTAACGGATTCCGTAAGACCTATTTGTGACATCAGCAG
ATCGTGTTTGAAGTGGTAAGTGGCTTTATTGTGGCTGTTCTTTGTGGCGGGCTTGCAGAA
CAGCATGGCCTTCTCGTAGAGGAAGATATGACGTCGCCGGGGCCGTATCCTGAGGCGGAG
GTCGCGCTTGTTCTCCGATACCACGAGGAACGAGCCCTGCATCAGGAGTTCGCCCTGTTG
ACTCAAGTCCACAGGGACTCCGGTTATGGCTATCTGGTGCATGGAGTCATTCACGCATTT
CAATACGACGAGCATGCAGTCCAAGGCCTGCTGGAGGCCGGTCGTCATTGATCCACACTC
GCTGTATCGGAGTAAATCCTTTAGCAGCAGCTGGTATTTAGTGATCCTCTGCACCGGCTT
CAGGAGGTACGCAGCCAGCGGCAGCTTGTGTCCGAGCCGCAGCTGACACGCCTGGAGGAA
CAGATGCGTATCCACTAACGTCTCCCGCAACCTCTCCGATCTAGGGATGTTCTGACAGTA
GTAGCTGTACAGTCTGAAGAAGGTCTCCCTCTTCTCAACAAAACACAAAGCGACGAGTTC
TGTAGCGGAAATGCATCGCTCCAGGTCCTTAAGGAAGACATCCTGGTGGAATGTGAAGAG
TTCGTGCAGATTACCGAACAACACATCCGCCTGTCCGACCAGCGTCGGCGGCAGGAGATG
CTGGTTCTCTGGCTTCTCGATTTCTTCTTTATACCCAGAGAGTATAGATCCGAGTTCTTG
CACGTATACTTTCTCGGTCTGCATTAGTTCAGCTAGAACGTGTCCGCGACGAGACCGTCG
AACATCCGAGTCGTCACCGCCGGAACTCTCCGAACCGCCAGATGTTTCCATCTGTTGATT
AGCCGGAGTTGGTAGGGCAGCGCTCTGCGGGGGCACGGACTGTACGGGGCGAGCCGGTCT
GGCGGCCGCGCGTTGCAGTGAAGCTCGTTTCACTGACACCATCAACCATACGTCCTCAAC
TCTTTGTGCTACTTGAGTGACCAAAGCTCTTGTTTCTTGGGTGGCGGACTGCATAAGCAT
GTCTCGGAACTGTTCAGGTGCTGTCAGCCCAAAGGACTGAGCGTCTTCCAGCAGCTTGTC
TACAGCCAGCAGACCTCCTTCTCCGGCTAACAGCTCTACTCCAGTTGCACACCATTCGTT
CGCCTTATCTATCCTATCCATTAGTTCTCTAGCTTTCGTGAGTAGTAAATTTCGTTTTTG
TATCTTGTCGATAAGCAGGGCGCTTGTACGTCTTAGTTCTTCGCATTTTGATTCTATATG
ATCGACGGAACTTAGCGGATCTTGCATTAGTTTATCACCATCATCGATCACTGAAGATGC
AGTATCAAGATCACAGTTGCATAATTTCTCAAAGTTGTGCGCTTCCTGAATGAGACTTTC
CACTCTACTGGCTGTTTCTCCCACTTCGGTCATGTCACACGCTGCTTTTAGATGATGATC
TAAAGTTGCCTGCATCTGTTTGAAATTCAATAAAAACGTTCTAAACTTCAACCAGTGATT
GAGTTTTGTGGAATGCTTCTGCCAGAAATTATCAAACTGCTTCTCTGTCTCTTCCAGTTG
TACTAGTAACCTTTCGACGGCAGCTACATGACTTATAATGTTGTACGTAAGATTCGGCTT
CCGCACTTGTGTTAATAAATCTTCTCCTTGTGTTGTTGCTATTGATAATTCAGATTTTAA
AGCTTTATACCTAGTTCCCTGACAGTCTAATAATTCTTTGGTTTGTGTGGGATCGTTTCC
CATATCGCAGTCGACTATCTCGTGCATGAAATCGTCCAGCTTCGTCGATGTCTCTTTCAT
AAGCGTTGAAAATTTCTCTAAAGCTATTCGCTGCTGTATCCATTCAGAATGTGAATATTG
TAACTCCCCGCCAAGGTCAGGAGTCAGCTGAGACCTTTCGAAGTGCTCGTAGAGTTCATC
GACCGTGGAGCACACTAGCACTTTGAACCTGAATTCCTCCTTAAACAGTTTGCTGCTGAC
CTCGGACAGCGCTTTCTGCAGGAAACTTGACGGGCGAAGAACGTAAACCGCGTGGATTAT
ACCAGGGAAGAATTCTGAGATCCTAAGTAATACTGTTTTTACAGAATTCCATCTGTCCTT
TCTTCTGTCCACTATAATGTGGAAGCCCATATCTGCTTCTAGTATCGAAGGCACAGAGGT
GAGGTAGAGCAACAGTCTTCGGTACTCGGAGGCAGTGATGAGATGAAAGTTATTGTTGTC
CGGGAAGGTGATGAGGGGACGGTGGTCTTTGGCCAGTCCTCCGGTGGCCAGCGCGTATTG
TGGCAGTAAAAGCTCTCCCACATTGCGAGCTTCGTCACCTTCGCTGCCGCACCCATCACA
CTCCGCTTCACGAGCAGCCGCTAGCCGTTCCGCCTTGGTGCTACACTTCCAAAACTTCAT
GTCACCCTTTGTTGTCAACAACGAGCCGCGAGATGACACCGTACACGCCCGCTAAGGCAA
GTCGCCATCGTCAAACTGTCCGATTAGGACCGAAACAATGACTTTTGTTTACAAATGAAC
GACGCGGAGGATTTAATAAATTGGCGAGCGAAGTGGCCGGCTG
(4783 bp)

- SilkBase 1999-2023 -