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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29660_c0_g1_i3
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		nuclear_RNA_export_factor_1_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:6.23 TPM:3.47
ORF EntryO_BomoIG13727_complete:A_BomoIG_DN29660_c0_g1_i3
Sequence
(Nucleotide)
GAAATCATATGTTTTCGAAAATTAAACATAATATTGTCATGTTAACACAATAATAATATG
CTTTTGTCACACTCGTGCATTTCTGATATGTTTAACTTTTTTACAACAGATTCTCCTTGA
AAAGCAAAATATACAAAATATTAAATTAAAATAACCCTCAAACAATAACAAAAACACCGT
GGATTGTAATTTTAATTTTGTGTTTTTTGTGGATATTGGTTATTAAACGAAACAATTCAT
TAAAACTTAAGTGTTTAAAATGCTTAATATTTCTTTATTAGTAGGTATATCTTGAAGAAC
GCAAATATTTACGGTGACAACTGTGATTTCACAGTAATGAAAAAACGCAAAGCAAATTCT
AACCTCATAAGAGTTACAAATAATATTGTACCTATAAAGCCTAAAAGTGTTCCTGCACCA
GCTGGGAACAAGATGCCGATTTGGGAGCCTCGTCAACCGAATGCCGAAAAAACACACATG
CAAGCTCAGACCTCAGCGATATCAAATCCCAATATTATGCAGATGAACAATATCCCTTTC
TCAACAAGTTTGACTGCACCTGCAGAGAACAATATGCCGGTGTGGGAGCTTCAACAGCCC
AATATCACAGGAGTACAAGAGAGTCCCTTCCGACTTCAGCTGAATCCGACACCCCAAACA
ACACCAATGTTGCCAAACTTCCAACATCCGCCCCACGAACAAATGCAATACCGACCTCAG
TTGCCTATTCACATACACAACGACCTGAGATCTTTTGTCCCGCCCACACTTGGAGTTCAG
CCATCACCAAACTTCGAATCTATACTGCAGCAGCAACAGTTACCGATAATACAAACTATA
CCTCCAACGCAAGCAATGTTTACGCAACCTTTGCCATCAACATCAGCAATGCAACTTCCG
CAACTGATACCATCGGCACAACTAATGCAGCCTGCGCAACCAGTGCTGTCAGTGCCACTC
GCGCCACTCATGCCGTCACCACACCCCATGCCCGCACCGCTGCCGGTGCCGCCACCGCAG
CCACAGGCCCCCTTCCCGCCGAGACAACAAACATCAGCGGAGAGCCATGTGATCGCGTCC
CATCAGAACCCATCTGCGCGGGACGCGTGCGTCGAACCTCCGAACTACGCAGCCTTGGAT
ACTTTACAAGAAACAGAAGACAGTAGACAATCGACATCACGGGACCCACCAGGGGCGTCC
CTAAATAAACGAGCGGCCCCCCACAAGCGGAGTGCGGCGGAAAAGCAGAAGAAACAGAAA
CTAACCACACATTTGAGATCCGAAAACACTCAAAGACCCCAGCAAGTAGGTAAACCAACA
ACGTCCAGTGAGTTCACCCCGGTCCATCTCCGCGAGGACGTGCGGGCCAGCACGGAGCCC
GTGGTGATGCGGTACCTCATGTCTTGGCCGTGGAAGAACGAAGTCAGGATTAAAGCTTCT
GCGACAGTCAGACACTCCAAGTCGCAGATGATAGCGGAGCAAGAGCTGATGGAACAGCAG
TACAGCGACCCGGCGCAGTTCTTCCAGGTGTCGGTGCGCGGGCACGGCGCCGCCCGCCCG
GAGCCCGTGCTGGACGCGCTGCTGGCCAGCGTGCGCGGACGCAGCCTCATCCCCTGCTTC
GTCCAGTTGACGGAAGACGAATGCAAGTTCCTCGTGATTCGCTGCAAGACGGCGCTGCTG
GCCATACACAAGTACGGGTTCGTGCTGGGCGGCGACGGCGCGCGCATGACGGTCACCGTC
TCCGCGGTGGACATCACCACGGCGACGCTGGACTTTTTACCCAAAGTCGTCCTCAAGAAG
ATTTTGACGTCGAGGTACAAGGACGGTCAGCTGGACCTCAGCGCCTTCACCGCGGGGCCC
GACATAAAACACTTTATCTACTACCCATTGAATCGCGTCAGCAACCAGACGGAGATATTC
CAAATAGAGTCCACGTTCATATGGGAGAACCTCACGCACCTTAACCTCTCACGCAACAGG
ATCACTTCGCTGGTCGGGTTGAACCTGGCGCAGATGACGCCCCGGCTGCGGCACCTGGAC
GTGTCGCACAACGCGCTGGGTCGGCTGGGCGCGCTGCTGGCGGGGCGGGCGCTGCCGCTG
CGCGCGCTGCTGCTGGAGGGGAACCCGCTGTGCGCCGACTGCACCGACCCCGACCGATAC
GTGCAGCTCGTCCAAATGATATTCCCTACGCTCGTCACCCTCGACGGGATCCACATCAAG
AGGAAAGGGGAAATCCCGAAGTCAGTCCGCAAGACGTACTGTCCGGACGACGCTAAGGAG
ATAGTGCACGAGTTCGTGCAGGTGTACTTCCCACTGCTGGACTCGGCGCTGGAGCAGCGG
GCCCACGTGGCGCAGCTGTACCACCGACACGCGCTCGTGGACATCAGCTACAACCCGGCG
CTCAGTGCGTGCGCTCACATACATACGGCTATTTCATTCATTAAATATAGATTAATATTC
GAAATAAATGAACGAATGAATGAATGAATGAATGAAAATTCTTTATTGCACAAAATAGTG
TACAAAGGTGAATTTAATGCTATGCAG
(2547 bp)

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