SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN29602_c0_g1_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		E3_ubiquitin-protein_ligase_RING1_[Bombyx_mori]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0005634 C nucleus
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0031519 C PcG protein complex
GO:0035102 C PRC1 complex
GO:0036353 P histone H2A-K119 monoubiquitination
GO:0046872 F metal ion binding
GO:0071339 C MLL1 complex
Transcript
Level		FPKM:3.88 TPM:2.16
ORF EntryO_BomoIG13778_complete:A_BomoIG_DN29602_c0_g1_i1
Sequence
(Nucleotide)
GACTCTTTGAATTTTCACCACTGAACTAATTTTCACAGATCAACATGGACGACGCGACGT
CTGTCAACAGTGTCAACTAAAGAAAAACAAAAAGCTTAATATTTCCGTGGAATTTAGAAT
ATATTGGCAAAATGTCTTCAACAGAGCCTTCGCAAAATAAAACATGGGAGCTATCCCTTT
ACGAGTTACACCGTACTCCACAAGAAGTGATCACAGACGCGACGGAAATAGCGGTCTCCC
CACGAAGTCTTCACAGCGAGCTGATGTGCCCAATCTGTTTGGATATGCTCAAAAAGACAA
TGACTACAAAAGAATGCCTCCATAGATTCTGCAACGACTGTATTATAACCGCTTTGAGAT
CGGGCAACAAAGAGTGTCCGACTTGTAGAAAGAAATTAGTGTCCAAACGTTCTCTTCGAC
CGGACCCCAACTTTGACCTGCTCATATCCAAGATATATCCCAGTAGGGACGAATACGAGG
CTCACCAAGAACTGGTTCTGGCTAAACTAAGCATGTCCCATTCACAAGCTTCTCTCGTCA
ATTCTATAACCGAAGGCATAAAGTTACAGTCACAGAACAGACCTCAAAGATCAAGAAAGA
ACCACGACGAGAGTAGCAATGCGTCTAATTCCAATGGTAATGTAGAAACAGCTCAAAATG
GTAGTAATTCTGCCACTCCCAAAGATGGAACTTCTTCAAGCGGGAATCCTGCACAATCCG
GTCAGTCAACATCGAATCCTGCTTCTGTGAGAAGTACACCATCTCCAGTCCCGTCGAATG
TTTCATCAGTATCCAAAAACACAAGTACAACTAAAAGGGCCAAATCGGTATTGACTTCAG
AGAGAAGTGAAGAAAGTGAATCTAGTGATGGAAGAACAGAAGGAGAGAACTCGATGGACA
CGGAAGGAGAAGGGGAGCCCCTAAACCCCAATGAGATAGAGCTAGTCTTCAAACCCCACC
CTACAGAGATGACTGGGGACAATCAACTTATGAGAGCTCTTTGTGACAATTCTGTGAGAT
ATCTAAAGACAACACCCAATGCTTCTGTCGATCATCTAAGCAAGTACCTAGCGATGCGTC
TCACTTTGGATCTCGATGCAGAGCTACCAGAGGCACTCCGGCTTCTGAACTTTTGTATTT
ACGTAGCACCTTCGCCTGGACAGTTTGTGCTGTTGGCTGGCTCACAGACCCTTCGTCAGA
TTATCGATAAGTTCTGGAAGGTCAACAAACCTTTGGAGATGTTCTACTCCTGGAAGAAAA
CCTAGAAGTAGGATACATTTTAGTTATGTGCCTCTTTACATAACTAAAATGGTGATATGC
AGTGAATCCAATCTCATAGTGAAATCGAAATATATATAAATAAAAAGAATATTTTTTAAA
TTGAGACATGGACTCTTATGATAATGTGATAAGAAATGTGACTATAATAAAAAAAAACAA
ATCACAATACCTATAACATTTGTAAATTTAAAACAAATCAGTAATCTTTTCAACCTAATT
ATACTAAGGAATATTCTTGAAATTGAAGTAGATTGATGCATTATTGATGTATTAAATAAT
TTAAATAGTTAAATAGTAACATTTGTCATTTTGAATGAACCAATATCAGTAACGGGACGT
GACCATATTGTATAATAGTACACTTTACTCATAAATGGTGTAGTATTTTGTACAACTTTG
TGCAATTATTAAAAGTTTAATTCTCAAAAAAAAA
(1714 bp)

- SilkBase 1999-2023 -