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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoIG_DN1708_c0_g1_i1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		LOW_QUALITY_PROTEIN:_transducin_beta-like_protein_3_[Bombyx_mori]
Ontology
GO:0000462 P maturation of SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0006364 P rRNA processing
GO:0030515 F snoRNA binding
GO:0032040 C small-subunit processome
GO:0034388 C Pwp2p-containing subcomplex of 90S preribosome
GO:0044822 F RNA binding
Transcript
Level		FPKM:4.40 TPM:2.45
ORF EntryO_BomoIG9347_3prime_partial:A_BomoIG_DN1708_c0_g1_i1
Sequence
(Nucleotide)
GGAGGTTGCATACAATTTACAGTGTAGGTAATGAAATTTAAATCTTGAAGAAGATTCGTT
AGGCGCTCAAAATGTCTCTCGGTATATGGTAAAGCGCCCTCTATGAAATTAGCCAAAGAA
GGCACTTTTAGATTACCTGAAATAATTTCCGGAGCTAATATATTAAAGACAAGTTGAGCA
GCGTGACAATTTTTATTGTTTGTATTCCATTCTACTGCAAATTTTAGTAACGTTTCTTTT
TGCGTGTGGCTAATATCGCTTAATGTTTCTCTAAGCTTTTCACTTCCACCTTTCAGAACT
TCATTCACTATTTTTAACACGTGCAGTGGCCTGTCCATTCGTAATGCTAATTTTAAAGCT
TTGAGTAATTTTTTGTCATGAAGTAAGTTATTTAATTCCTGTTCTTGCAAAATCAGTGCT
TCTCTCTCCTTGGTCCTTCTTTCTCTTTGTTCCAATGTTACATCTTTTAATTTCACTAAT
TTTGAATCAGAACCACCTGTGATTATGTATGATTCATTTTTGGATATAGCTAATGACCAC
ACTTTACCATCATGGTTGTCTAATGACATTTTACTTTCTGATGTTTTGATAGTCCATAAC
TTTAATAATCCATCAGCTCCACTGGATAAAATCTGTTGGCCTTTACTAATGAACTCAACT
TTCAGAACAGAACTTTCATGACCTTCGAAAGTTTTTAGGCAACTTAAATCACTTATGGAC
CATAATTTAATGGAACTGTCAGCTGAAGATGTTAGCACTACTTGATCGACAGGAGAAAAT
CTTACACACCACACTCCCCTTCTGTGACCTTTTAATACACCTAACAGTGTCAAGTCTTCT
GCCCAAATCTTTGCAGTTTTATCTTGTGAACCAGTAGCTATCATTTTATCATTGGGTGAT
ACTGCAACACAATTAATGTCCATTTGGTGAGCTAATTCAGTGTGACTACATTTAAGATTT
TGTTCTACACATTTTTCTGCAGGCTTACATACAGTCCAAACTTTTATGCAATTATCTTGA
CTAACCGAGGTAAAGAAATCATCGGATGTTTGTGAAGTGTAAACAGACCCAACAGAAGCA
GTATGGCGAGTTCCAACTGCAAGGCAATGAATAGTGTTGTTTGGTGTTTGAAGCCACAAT
CGAACGCTATTGTCTTTACTTGATGAAACAAACATTTCAAGTTTAGTTGGAAAGTTTGCT
AAGGAGAGCACTATATCTGTGTGACCTTTAACAATTTGACAATTCATAGTTTCTAAATCA
TAATACTTCAGATCTTGGCTATTTGTGGCAACAATTATATGGTTCTCGTTTTTTCCCAAA
AATATTATGTCAAGAACTTCATCAGTGAAACCAATCATCTGTTTCACAGAGTCAAATGTT
TCTAGGTCATGTATTATAATGTTATGATCAACTGTCACTACAGAGACCATATTTCTTGCT
TGATTATATAGTAGGTGCGTTATTGACAGCCCTCCTTCTTCAGTTGACGGGGATACTAAA
CTATTGATTTGTTCAAACATGAGTCGGCTCATTGACAAATTCCATACTTTAACAATTCCT
TTTTCTCCAGCACAAGCAACATAAACCCCTTCAGTTTCCAGCTTTTTATTAAAATTTGGG
ATTTTAAATGAAGGTGGTAAGAGAATGCAGGATTCAATTCCTTCATACACAGGAACAACT
TTAAGAGCTTTGCTAACATTTAAATCCCACAATATGAGTACTCTGTCCCTCCCAGAGCTG
ACCATGTATTTACCATCAAGTGTGAATAGCAAAGCAGTTACCTTACTAAAATGACCTGAA
TATACTAATTGCTCTTTACCAGTTTTAGAACACCAGGATCTAATCTTTGTATCATCTGCT
GCTCCAAATACTAATTGTTTAGAAGAATCTGGATGATACTCTAACACAGAGAAAACACCC
ATAGCTCCACGAAGACTGCTAGTACAGGTATTATGTCCTACATCCCACAGTCTCACATTA
CCGTCGGAACCTCCTGAAGCAATATTTTCATCTGTTGAATCAAAGGCTAACTTCACAACA
GGTCCTTTATGGCTTGATCTCCAAATTTTTAGTTGGACTCCAGTTTCTTTGTCCCACATT
TTAATTAGGCCACTTTTGTGTGCAGTAACAATACTTTGATTACTATGTGATATTTTAAAT
GTATAAATCTGGTCATTTTCTGCATCTTCCTCAGTTTCGCCAATAATAAGAGAAGTGATT
AGAGTGTCGACTTCAACCACCTTAATAGCTTCATCACATAGGCAAAGCATTTGTAAGCCA
TCATTTGTCCACTGTATATCACCACCTGTATAAAATGCAGTAAACTCTGCACTTTTCTCA
TATATTTCTTTTAAATTTGACATTGCTCTGGATTACTGTTTTAGTAAAACAAAAAAATCA
AAGCAAAGAATATATTTTAACGATCATATTATCCTTAGCAAGCCTAAATAAGAGCTCAAA
ATCAAAACCAAATCTTCAACTTCTTTAGAAACGCATAGTACAAGTAAAAGAGCTAAACAA
AACCATGCTTC
(2531 bp)

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