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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9986_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_spatacsin_[Bombyx_mori]
Ontology
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0005765 C lysosomal membrane
GO:0005829 C cytosol
GO:0005886 C plasma membrane
GO:0008088 P axo-dendritic transport
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0030424 C axon
GO:0030425 C dendrite
GO:0031410 C cytoplasmic vesicle
GO:0045202 C synapse
GO:0048675 P axon extension
GO:0070062 C extracellular exosome
Transcript
Level		FPKM:7.53 TPM:8.25
ORF EntryO_BomoFB11204_5prime_partial:A_BomoFB_comp9986_c0_seq1
Sequence
(Nucleotide)
GTTTTTTCAATCATTTGAATTTTCTTTATTGGAATTTTCCTCGCCTGAAGAAATGTGGAG
TTATCTTGTAGAAAAGAATAAAGCAATGATTTTGATCCGTTGGATAAATGTTCAGCTGTC
GGAAGTGGTACGAGACAAGAATGCTCGTTACAATTTTTTCAACAACGAAAGCTTTGTCCA
GAAGCTGCTCAATGTTGACACTACTGGCTTCGACACTAAAGTCCTAGAAAGTTTGGATGA
AATCTTTCGTCATTGGTCGATTACACACGAAATGATAGCCAGCGTGTCTGTAAGCAAATG
TTACGCTTACACTAAAATGTGCATTTATGATACACTTTGTTCTTATGGTATTGTAAATGA
TGACGAACGAGATGATTTGTATCAAATCATTTCGAGACTTGCCCATACTCAGAATTTGAA
ATTAGTAGATGACATTTTCACGGAATCTTGTTCTACCATAACTAAACAACATTTTTATGT
ACAGTTGGCAAAGTATTGTGTGAAGAATAAACTGTATAAAGTATTGACTATGTGTGTGGA
AGGCCACATTTTAGACACGGACTTGTCCGGTGTGGAGCAGGAAGCAAAGGATTGTATAGA
ACTTTGGCTGCTATTTAAAAGCATTGAACAAACTTCCGATCGACAAAGTCACGTCCTTCC
CGTATACAAGACATGCGAGCAGATAGCCAAAGATAATATTCATGATTACATTACAGCCAA
TCCTCACCTAGTCCTAGGAATGATTTTGTTGGAGGATTCTACAAAATTGTTTGATATATT
TTCCAAAGAGGACTATTTACACTTTACAGATTTTGTTTTGCCAAATAAAATATATAAAGA
CAAACTTCCTCATTTGCACAGCGTTTACAAAAAATACTCAGATTTGAATCAAATGTATGA
TTCAAAAGATGTGAATGTGTACCAGCTACTGTCCGGATACAGAGGATTGGACGTTTCAAA
AATATTTGAATTCCAATTGATTAACCAGACCACAAACAATCTCTTTGCTGATAAACCTGA
CAGGCGAAGCCTCGGTAGTCTGCTGTCCAATGATGTAGACGTCAAAGCAGCGTGTATAAA
AGCCTTATCTCAAAAAGGAACAGAAATGCCAGACTTTGCAAATGAAAAGCTAATGAAAAG
ATTTGGCTACGTCGCTAAGTTGAATCACCTGTATTATTTAAAACAGTATCGGCCTTGTAA
CGCCAGTCAAGCCTTTGTGGCTCAGCAATACCAGACATACAACCGATTGCAAGATAAGAG
CATCAAAAGCGCTTGTTGTGAAGCGCACGCTCTGGCTTTACAGAATTGGTCCGATCCGGC
CCTTACAGCTTGTGCGGTTTCGTTCGTAGCAATGATCGGGTGTAATCCAACAAGATGCAG
GGTCCACGTATCTGCTGCGAATATGATAAAGAATTACTTAGTAAGAAACGGAGTGTCCGA
AGAGAAGGCCAATAAAACGGTCAACGAGTACATGACCAAACTCATTCAAAGTAACGACGA
TGTGGCCAAAGATATTTTGAAGCATTTAGAGGAGATAACACTTCACAGTTTGAAAGTGAA
GCAGGAAAACGAGGGCAAGTTGGACATGTCGTTCGTGTTATACGAATCACAAACAATGGT
GAAATTCGCTATGCTCCATAATTTACCACTTCCCGAAATGCAGCTCAGGGAGTTCATCAA
AACAAATTCGTGGTTCAATTTCCTATTGTTCGGAGACGTGCTCCGATACCCTTTACAGCA
GATGCTGCATTTATCACAAGAATTTGAAAAACGTTCGTATGCCGAACACTTAAAGCATAT
TATGCTGCACAAGAATACGGAAACAGATTGTTCCGATAAGGAATTAAAGTCTCCGACGAA
TGGTCAGAGGCGGCTATCTAGGTTGAATTCGGTCGAAATTAATATAAAACCGAGCGGCGG
ACTGGAAGGAACATTCAATGCGTATTTGGGCCGGGAGCTGTGGGAGGTGGCGGCCGCGTG
CCACGGCCCGGAGGACCCTCCGGCTGCGCTGCTAAGGGCTGCTGATCTGTGTCGAGAGCC
ACTCCTCGTACTAATAGCCAGTTGCTACGAACCAAACGCCGTGGACGTTCTCTGGGCGCA
ATGGGTATTGTCTTCAATGGGACCCACGAAATGCACATCGAACGACATGCAACAGATAAT
TGATCAGCAGTGCTCATCTGCTGAACAATTCCAACGGGTGGCCGAACTGTGCTTGTACGA
AGGATACATTACTACTCTGCACGAATCTATGACCATATTTATGCCGGACAGCCCACTTAA
ACTCCTCACCGGTTTTCTCTATCGCTGCATAAGAAAACATCATTTCGATTTGGAGTCTAG
TAAGCTTTTAACGAGCTTTATTCTGCATTGTCAACGAAAATATAGCGTGGAGTCCAACAG
GTTGTCGTGGCAAATGTCAAAAGAATTCCTCCAGCGCGTTGCGGTCTCCTTAATCAAGAT
AGCGATCAGCGAAAACTTTGACAGCGCCTACCATCAAAGAGAGTTCTTGAGATTGTTGGC
TAAAGCGGAATTCGGAAAAGACTTTTTAGTGCCGTCGCCGAATTTCATCACTCTCTTCGA
AATCCTTAAGATATCTATGGAGACGTCGTTCGTCATAAACATCTCGAGGATGTTCGAAGA
CGATTTTAAACAGCATCTTTGTGAGAGCATCGACGTGTACACTTCGAATCGTAATTATGA
CGTGGCACTTAAAATAGCGAAACTGTCGGACTTATCGATCAACAAAATATTGATCGCGGA
ATGGACAGATAAATATGAAGTGTTACTGCAAAAACATGATGGTATCGAGGAAAAAGATTT
GACACTCTTTATAGCGGAATGCAGTGAAGCGTTTAAAAGGGCAGGCGTCACTTTCAAAGA
CGCAGTAGACTTCCTCCTGGACTACTCGGCGAAGATAAAAGATCCCGTTCAGAAATTTTA
TTCCCTAAAGATCATCATGAATTGGTTCGAAGAGAATTTAGAGTACGGTCGTTTGCGCGA
AGAAATCGAACATTCAATGTGGAATGCGTACTTTAAAACCGAACCGAACAGCATATTCTT
GAACAATTATGCGAACACGTTACACTTCATAGCGACCGGACAGAAAGATAGAAACGTCTC
GAACAACGTTGGGAGCTCGAACTCAGAGAGACCCTTCTCGATGACGTTGAACGAGATCGA
AGTCGAATCGGATGTCGGTAATATCGAGAAAACGGTCCTACTCGAGGAGCCCGAAGCGAT
TGACGGTTGGCGGAAGGTGATCTTCCAGCTTTTGGAGCTCAGACTCATCGTCGACGCATT
CCGTTTGTCTACGCTGTTCAAAACGCAGCCGGAGTTCAGGTACCGGCCGCCGCCGTGCCC
CGTCCAAATCCTGAGATCCAGCCTGAAGCTGGCCGAAGGAACGTGCTCGCCTTACGAGCT
ACCCCAAGAATTGAGATTAGTGATATCGTCTCCGGTTTTGCAAAACAAACTGTCAATTTC
AGGCGTGTCCGACGCGAGTTTTGAAGAGCTGGTAGTCATACAAGAGAAACAAATGAATGC
TCCAGACAGCTCGCACCTCGCGGCTCGCGAAGAGGCCGACCGGCTGTCCGCGTTGGACGC
CCTTGCCGTGCGAAGCGGCTTGTCTCTAGCCAAACAGGTGGCCAGCTACTTCCGGATAGC
TTTGCAAATCGGCTGGGACTATTCGTCGGTGTTGAAGTATCAGAATCGAGCCCTCGATTT
TATAAATTTCGTGAGCGGCCGAGCGCGGCTGTCGTTGGCGAACCTCGTTTTTAGAACATT
CAACATCCCCACTAAACAGGTAGCAGAATACCTTTGCCGGGAGATGGTAGCAGCGATCAT
ATCGCCGCATCTGGTCAAGACGTCAACCTTCAGACAAAAGGAGCACTTTCAATACACACT
ATGGGGCTACGCGATCAACTCCGACATCGAGATGTTCCTAAACATGAGGCCGGACGCTTG
TAGCCAAATAGGCAGGCTGATACTCGATCACCTAATGGCCTTCCAGAAGATATACAAAGC
GACGACCGTATCGAGAGTTCCAGAGAACGCTCTAGACGATAGTTGTCTTGACGTCGAGAC
TTTGATAGATGAAGAATATCAGCACGTTGAGGGAGAGGAAGCGGGTTCGGTATTAACGGG
CGAAGGTACCTTACTGTCTGCGGAAACTGAGTCCGTGTATTCCGTGTCGACGGTCTACAG
CGCTGGTAACAAGCTGACCCGCGACTCCCGGAGGAATTTATTCGATGTTATAACAAGGAA
TAACGTGCACGTCCGATACGAGGTCAAATCGAACGTTAGGAAGATAACGAAGGGTGCCAA
ATTGTCATCGAAACAGGTGAACATAATAGCGATAGAGTTGCTGGTGATGGCGCACGAGTG
CTTCTCTTGCGCGTGCGACACGGAGGGCGTGGCGGTGACGGTGCGGTCGGCGCAGGCTCT
GACGTCACGGCTGCTGGCGGCCCGCTCGTGGCGCCTCATGGTGCGTCTGCTGACCGGCCT
CGCGCGCTACACAGAGTGCGCTTATATATTCCAGGCGCTAAGAGACAATCACCAATTCGA
ATATCTTCTCGGTCAATTCGATTATATGTTAGGGCAGCAACCCGATAAAATAGCGGAGTT
CAAACAAGGCCTGCTCGATTTCCTGAAGAACCATTGTCCGGGCGATACCGACACGTACAT
AATGGTCGCCCTACACTTCAACATGTACGCCGAGGCGGCCGGCGTCAAGAAGAAACAGGC
ATTGAACTTGATTGAGGATTTAGAAAAAATGGCTTTGGATGCCGCCAGGTTGGTATCGAA
GAAGCCCTTCCAACCGCCGACCTGGTTGTTGATTCACGACAACACCTCGACGAGGCTGCT
CCTCGAGACCGCGCTGAACCATTGCACGGACGCGGCGGAGCTGTACCTCCAGGGCGGATG
TACTGGATTCGCTGGCGAAATGGCGGCTCTGGCGCAGCAGATCGCCCTACAAATATCCTT
ACTAAACGCTTCTCCTACACGACTTATATTGAATCGAACTACGGAAAAAACGTATAGACT
TGTCAGCGAATATCTGAGTTTCATGGAGGGTTTAGTGCTGCTTTCGGGACGCAGCGGGGA
GGCGTGGCGCGAACTCGCCTACAGACGCGCGCTCTGCAACGACCAGGCTTACCTCCGGGA
CATGGTCACCTACAGGCCCGACGTGGCGCACGACATGCTCAGCAGATATAAAACAGAGAG
AAACAAGACTTCCGTATCGCAGGCAGCTATGACTGAACTCCGTAATCTGTGTAGATGATA
TAAAATAAATATTTGAGTTACTCACTCACAAAAATACTATATTCAACAAAGTATTGAAAA
AAAACATTGCATATTTAATCTTAAGCTATAATATTGCATGCTTATAATATAATCGAAACA
TTATTAATCAAATAAGATGGGACTGTTGCAAATGGCGTGGGACATGACAAGGACAAAGAA
GATATTATTATAATCGAAATAATGTAACCATTTATTATTGTTGATATTATAAAAATAATC
GCCTGTGAGATTTATCGAGTGGACTGATTAATTGTATTTTTTTCTGTATCTAAAATAAGA
GATCAATAAACCAAGAAATTGAATTATTTGTATTATAAGTTATACGTAG
(5629 bp)

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