SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9978_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:15.96 TPM:17.49
ORF EntryO_BomoFB11178_complete:A_BomoFB_comp9978_c0_seq2
Sequence
(Nucleotide)
CGAGAGTGGCGCGGCTCTGACGCGATTACGCCCGCGCAATCGAAGCGGGCCGCAGAACGC
CAGTCCGCGCACACGCCGGGAGACGCGCGGAGTTCTCGCGACCGCGACCAAACCAACACG
AACAAACAATCGAACGCCTTCGAACGAACCTCAAAACTACCTCTCGCATCGCTGCCTGCT
AATCTCTAGGCAAGAGCATTGACCACCGACCGACGCCTGATCACAAGCTATATCTGCCCT
CTGGGAATCCTCAATCGAGGCTGCTTGCCGGATATACGGGCTATTTATAAAATTCCGCCG
TCGAGAGAGAAATGAGACGTAATTTGTTGGTGGTTTTGCCAAGTTTGCACTGAGATTTGC
AGCTTGATGATAGTGATAAACGCTGTAGCTAAAGTGTATATAAGGATTTATTTTAGAAGT
GAAAGAGAGGTGCTATTTAGCGATCTAGTGAATTCTAGAAGATAAACTAATTTATTGAAA
ATGGTGCGAGGACGTTATTCTACTTCTGATGTAGGGGCATTGGGCGTGGGGTACGCTAGT
GTGGGACTGCAGCACTCCAGGTCGGCGGTGCTGCACGCGCAGGTGCCGCCCCACTACCGA
CCCGTGATGCCGCCTCACGCGCTCCTCAATAGCGCCTCCAGCGGGAACGTGCCACATGCA
CAGGGGCCACGCGTGCACTTCAAGCTGCAACCACAGACTATCATTCCTGAGAAGAAGAAA
TCCCCTCCGTCGTCGCTGACGAATGGTAACGGGAAGAGCATCCGTCCACAATCGTTTACA
CCAGGATTGAAAAGGTCAAAGTCCTTAACGTCAGCGGATGCACTCGCAAGTGGCATGGCG
GCCCTGGGTCTGGCAGCCGACGCCGGCGACCTTGGTACATTCCCGCCGGAGATTCAAGAG
TGTATTGATAAAGCCCTGGAAGATCCGAATGCTGTGTGCGCCCGTACCCTGATGGACGCT
GTGGGGCACCTGGTCTCGCGCGCAGTGGAGTCGCCGCGGTACGCGCTGCCGGCCGCCCGC
CGCTGCATCGCCGTGGTTGAGCGCGAGCAGACGGAAACCTTCCTCGAGTCGCTGCTTAAC
ACGTGCCAGCAATGGTACCACGATAGGGACAAGCTGTTGGGCGCGATGATCGGCGGTGGT
CGACCTCGGTTGATGGCGTTCCTGTCGTTCTTGCTGGAGATGTACTGCCAGCTGCGGCGC
CGGGCCATCCAGCGACGGGGAGCCAGCGCCCAGCCCGGGCACGTGCTGCTCGCGCTCATC
TGCAAGTGCTGCGAGGACTGCATCAGGCAGCCGGTGCCTTCTGCTAGTGATACTGAGAAT
CTGTTCTTCGTACTGACGTACATAGGCCGAGACTTGGAAACTCAGCTACCTGGAGATTTG
GAGCGATTACTTACAGCCGTCCGTGACGCTTTCCTCAATACTGCCGCGGCTCCTTCCATC
AGGCGTACTTTACTGCAGCTTATAGAGCTTCACGCATCCCGGTGGCAGTTACCAGGATGC
GCAGTTCTTTATTACTATCCTTCGTCCAAATAGCACGCTGTGCAAGGTGGTAGGTTGCAA
TGATATTGTCATCCATATAAACCTAGAATCGGATGTTCGTTAATATCTCACATTATGGAT
ATTATTGCAGGGCATATCATTTTAAATCATCTTTGATGATTGGCCTTATTTTAGAGCTAA
ATAAATTAATATATTTAGACGGATGAGGGTTTTATCGTGAGTATCTTGATGTGATGGAAG
TCGCGAACTGAATTTAATCTTGTGGGATTTATAGATTCTTTGTTATTCTCACTAAGAAAG
GATCGTGTTTCAAAAAGCAAAGGTTACGAGCATTTCTTAATCGAGTGTTCGCTCGTGTTT
CTTTCTTAGTACTGTTGCGTTAGTTAATGTACAGGAGGTATGGAATTGTCTTCTGTCGTA
GGCATAAAGCTGCCATAAGCTCATATTATTGTGCCTTTAAAATAATTTAATGGATATTTA
ACATTTTATCGTCACTTTCATGCAACAAATTTTAATAAAAATATTGAAAGTGTGGTAAAG
TGTAGTATTTATAAGATTTTGTTATTAGCTTAAGGTGGATTCGAAAAAAAAATCTTTATG
CCTGGAAAGTATTAAAAAGGTACATTGTAGATTAATTTGTTTGGACAAATTGACAGTGTA
CACTACTGTACGATTCTCGCATAGTACTTTGTGCATTGTATCCTTGTCGTATTCTAATTT
AGGTATACATTGCCATCTATTAATAGCACTAAATATCTTGCTTGTTGTATCGTTTGCATA
GGATTCAATTATGTTTAGTAATTAAGTTACAATGCACTTATTCCCAACATAATTTAGTAC
TTCATTGCACTCAGGTATTTAATTTATGTTTCAAAAATGTTTTAGGATTTGTATCAAAAT
TAAAAAAATAAACGTTTGACTGAATTGTTTGTGGAAGTGAAACTATCTCTGTTTTATGCT
TGTGATATTATAAATTTAAGGTTTCTGGTATATTTTTTCTGTCCTAACCAAAGACTGTAA
TGAATGGGATATTTCGTTTTTATTTTTTATTAACAAAAAAGAAAACTTGTTGAAGCTGGA
CCAAATTTCTTGTTTCGAGCTCATTATCTGAGGTTGTGTACGAGTGAGCGAGGAGACGTT
CATTAACTTAACCTTAGATAGCTCTTATCAATATATAATTATCAAACTAATTTAAATGAA
TAATATGGGAAATATATTATTTAAAAAGACCTTTGACTTTTCATAATAATGCATTCTTAG
CGATTTAAGTTAAAAATACGTTTGTAGAAAAAAGTTGAAATTAAAAAAATGATGCTAACA
AAAGAGATATTGGTGTATTGTATCTTTATTCATTAATCTTATTACGGGCAATAACGTTGT
TTTTTGTTACCGCTGTAGTTTTTGTATGAATAAAGCACTTAAAG
(2924 bp)

- SilkBase 1999-2023 -