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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9978_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_CBP80/20-dependent_translation_initiation_factor_isoform_X2_[Bombyx_mori]
Ontology
GO:0000184 P nuclear-transcribed mRNA catabolic process, nonsense-mediated decay
GO:0003674 F molecular_function
GO:0003723 F RNA binding
GO:0005737 C cytoplasm
GO:0006417 P regulation of translation
GO:0006446 P regulation of translational initiation
GO:0048471 C perinuclear region of cytoplasm
Transcript
Level		FPKM:3.59 TPM:3.93
ORF EntryO_BomoFB11176_complete:A_BomoFB_comp9978_c0_seq1
Sequence
(Nucleotide)
TTATTATTATTATTATTATTATATATGCATATATAAATCGGAGAAAAGTGATCTCTAAAG
TGACGTCACAATATTAATTGAATTGTGATCTTGTTAATTAGTTAGCCGTGTCGCATTTCG
TATTGCCCGTATTTATTGTAGTTAATATTCTTTTATTACGTTGTAAATATCAACAATATT
TATATGTTACATGTGACATCGCGTTATACTATAATACTAGTCATCGATCTAGTGTGTGTT
TATTGTAAAATCATAATTTAATTGTTACTAAAAGAAATAATTAACGAAAACTTCGGTCGA
GTGCACTGAAGGCAAGAAGGGAATTCGTGTTTGAGAGCAAGTTACGTAACTGTCAAGATG
CAGACTCAATTAGGATCAGGCAATGATCTGCAGAGGAGCTACAGGATCCAGGACTTCGCC
ACGCCTGGCGTCATCATGAGGGAGCGGAGCTTCGTACGTCCTCAGTCGCATCACAACATG
CATCATCACCAGTTTTCAAATAATGGGAAACGACGGAGTATGATCCTCACCAACGCAAAG
GGAAAACCGACTCTAGAAATCTACAGACCACCAGACGGCGTGGTGTCAACGAACGCTGGT
GCCGCCTGTACGACCACCACGGCGGCCGGCAGTGGTGCTGCGGCCACCAACAAGCTGAAT
GTGCACGCAAAGGAGTTCACAATGGCGAAACCGATTGACCTACACAACAGAGGGGCATTG
GGCGTGGGGTACGCTAGTGTGGGACTGCAGCACTCCAGGTCGGCGGTGCTGCACGCGCAG
GTGCCGCCCCACTACCGACCCGTGATGCCGCCTCACGCGCTCCTCAATAGCGCCTCCAGC
GGGAACGTGCCACATGCACAGGGGCCACGCGTGCACTTCAAGCTGCAACCACAGACTATC
ATTCCTGAGAAGAAGAAATCCCCTCCGTCGTCGCTGACGAATGGTAACGGGAAGAGCATC
CGTCCACAATCGTTTACACCAGGATTGAAAAGGTCAAAGTCCTTAACGTCAGCGGATGCA
CTCGCAAGTGGCATGGCGGCCCTGGGTCTGGCAGCCGACGCCGGCGACCTTGGTACATTC
CCGCCGGAGATTCAAGAGTGTATTGATAAAGCCCTGGAAGATCCGAATGCTGTGTGCGCC
CGTACCCTGATGGACGCTGTGGGGCACCTGGTCTCGCGCGCAGTGGAGTCGCCGCGGTAC
GCGCTGCCGGCCGCCCGCCGCTGCATCGCCGTGGTTGAGCGCGAGCAGACGGAAACCTTC
CTCGAGTCGCTGCTTAACACGTGCCAGCAATGGTACCACGATAGGGACAAGCTGTTGGGC
GCGATGATCGGCGGTGGTCGACCTCGGTTGATGGCGTTCCTGTCGTTCTTGCTGGAGATG
TACTGCCAGCTGCGGCGCCGGGCCATCCAGCGACGGGGAGCCAGCGCCCAGCCCGGGCAC
GTGCTGCTCGCGCTCATCTGCAAGTGCTGCGAGGACTGCATCAGGCAGCCGGTGCCTTCT
GCTAGTGATACTGAGAATCTGTTCTTCGTACTGACGTACATAGGCCGAGACTTGGAAACT
CAGCTACCTGGAGATTTGGAGCGATTACTTACAGCCGTCCGTGACGCTTTCCTCAATACT
GCCGCGGCTCCTTCCATCAGGCGTACTTTACTGCAGCTTATAGAGCTTCACGCATCCCGG
TGGCAGTTACCAGGATGCGCAGTTCTTTATTACTATCCTTCGTCCAAATAGCACGCTGTG
CAAGGTGGTAGGTTGCAATGATATTGTCATCCATATAAACCTAGAATCGGATGTTCGTTA
ATATCTCACATTATGGATATTATTGCAGGGCATATCATTTTAAATCATCTTTGATGATTG
GCCTTATTTTAGAGCTAAATAAATTAATATATTTAGACGGATGAGGGTTTTATCGTGAGT
ATCTTGATGTGATGGAAGTCGCGAACTGAATTTAATCTTGTGGGATTTATAGATTCTTTG
TTATTCTCACTAAGAAAGGATCGTGTTTCAAAAAGCAAAGGTTACGAGCATTTCTTAATC
GAGTGTTCGCTCGTGTTTCTTTCTTAGTACTGTTGCGTTAGTTAATGTACAGGAGGTATG
GAATTGTCTTCTGTCGTAGGCATAAAGCTGCCATAAGCTCATATTATTGTGCCTTTAAAA
TAATTTAATGGATATTTAACATTTTATCGTCACTTTCATGCAACAAATTTTAATAAAAAT
ATTGAAAGTGTGGTAAAGTGTAGTATTTATAAGATTTTGTTATTAGCTTAAGGTGGATTC
GAAAAAAAAATCTTTATGCCTGGAAAGTATTAAAAAGGTACATTGTAGATTAATTTGTTT
GGACAAATTGACAGTGTACACTACTGTACGATTCTCGCATAGTACTTTGTGCATTGTATC
CTTGTCGTATTCTAATTTAGGTATACATTGCCATCTATTAATAGCACTAAATATCTTGCT
TGTTGTATCGTTTGCATAGGATTCAATTATGTTTAGTAATTAAGTTACAATGCACTTATT
CCCAACATAATTTAGTACTTCATTGCACTCAGGTATTTAATTTATGTTTCAAAAATGTTT
TAGGATTTGTATCAAAATTAAAAAAATAAACGTTTGACTGAATTGTTTGTGGAAGTGAAA
CTATCTCTGTTTTATGCTTGTGATATTATAAATTTAAGGTTTCTGGTATATTTTTTCTGT
CCTAACCAAAGACTGTAATGAATGGGATATTTCGTTTTTATTTTTTATTAACAAAAAAGA
AAACTTGTTGAAGCTGGACCAAATTTCTTGTTTCGAGCTCATTATCTGAGGTTGTGTACG
AGTGAGCGAGGAGACGTTCATTAACTTAACCTTAGATAGCTCTTATCAATATATAATTAT
CAAACTAATTTAAATGAATAATATGGGAAATATATTATTTAAAAAGACCTTTGACTTTTC
ATAATAATGCATTCTTAGCGATTTAAGTTAAAAATACGTTTGTAGAAAAAAGTTGAAATT
AAAAAAATGATGCTAACAAAAGAGATATTGGTGTATTGTATCTTTATTCATTAATCTTAT
TACGGGCAATAACGTTGTTTTTTGTTACCGCTGTAGTTTTTGTATGAATAAAGCACTTAA
AG
(3122 bp)

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