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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9975_c0_seq1
Scaffold_idBomo_Chr10
NCBI non-redundant
(nr)		PREDICTED:_chromodomain-helicase-DNA-binding_protein_Mi-2_homolog_isoform_X2_[Papilio_polytes]
Ontology
GO:0000122 P negative regulation of transcription by RNA polymerase II
GO:0000166 F nucleotide binding
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003678 F DNA helicase activity
GO:0003682 F chromatin binding
GO:0004003 F DNA helicase activity
GO:0004386 F helicase activity
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005700 C polytene chromosome
GO:0005829 C cytosol
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006357 P regulation of transcription by RNA polymerase II
GO:0007283 P spermatogenesis
GO:0007517 P muscle organ development
GO:0008026 F helicase activity
GO:0008270 F zinc ion binding
GO:0016581 C NuRD complex
GO:0016787 F hydrolase activity
GO:0016818 F hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides
GO:0016887 F ATP hydrolysis activity
GO:0031491 F nucleosome binding
GO:0032508 P DNA duplex unwinding
GO:0035327 C euchromatin
GO:0042766 P nucleosome mobilization
GO:0043044 P chromatin remodeling
GO:0045892 P negative regulation of transcription, DNA-templated
GO:0046872 F metal ion binding
GO:0048813 P dendrite morphogenesis
GO:0051276 P chromosome organization
GO:0051312 P chromosome decondensation
GO:0070615 F ATP-dependent chromatin remodeler activity
GO:0071923 P negative regulation of cohesin loading
Transcript
Level		FPKM:6.16 TPM:6.75
ORF EntryO_BomoFB11166_complete:A_BomoFB_comp9975_c0_seq1
Sequence
(Nucleotide)
GATAGTGAGTGTTGCTGGCTCGTCGAGAAGTGACGGCGGCATCAATTTCTGAATTAATTA
CCATTTGTCGCAAAAACTGCGCGTCCTTTATCTTTTCTAGCCAAAAATCTATCATCTTAT
TCCAAGTTGTGTTTGATAGTAATCTAAATGGCATCAGATGAGGAAGTGGACGGCTCTTTT
GCAGGTGATGAGGAAGTAGAGGAAGGTGAGGGTCAAAATGACAATTCCGGAGATAGTGAC
GAGGCTCCACCAAAGGAAGATGAAGATTATTCCCCTGAAGATGGTAGAAAAAAGAAAAAG
GGAAAGAAAAGGAAAGCCAGAGGAGAAGAAAAAAAGGGAAGAAAGAAAAAGAAGAAGCGA
AAGAATGAAAGTGAAGATGATGATGATTTTGGCCTCGAGATGGAAGCAGAAGGTGACAGT
GATTATGCACTGAGCGCTGTCTCTTCAAGCAAGAAATCCCGTAAAGGTCGAAGTAGCAAA
CACAACACACCATCCACAACTACAGCATCAGACTCTGGCTCTGGTATGCCAACAGTCGAG
GAGGTGTGCTCCTCGTTCGGCCTTACCGATGTTGACATACAATATGCGGATGCGGACTAC
GAAAACTTGACTACATACAAACTGTTTCAACAACATGTTCGTCCAATGCTCGTTAAAGAG
AATCCAAAGGTGCCAGTATCAAAGTTAATGATGCTAGTAGCTGCAAAATGGCGGATGTTC
TGTGAAACGAATCCACACTTAAGCACTAGTGTACCACAAAGTATGGGCTCTGAAGAGAAT
ACAAATACTTCTGCTACTTCTGACTATGTCTCTAAGAGACCCGGACGCACACCCAAAGAA
GCAAAGACTGATGAGACAATAGAGGAGCCCGAAGAAGAAGAGGAGGAAGAAGCAAGTGAC
GAAGGCGCTACTGTGCCGCGGAAACGTGGACGCAAGCCCAAGAATGCGACCGGCGCCGTC
ACGCCACGAGGCAAGCCCGGCAGGAAGCCTAAAGTACCTACACTGAAGATCAAGTTCAGC
AAGAGAAAACGAACCAGCAGCGAGGAGGAACAAGAAGGCAGCGCTGTAAATTCAGATTCA
GACGCCGAGTTCGAGCAGATGTTAGCTGAAGCCGAGGAAACAAAGCCTCCTGTTGCAGCT
GCAGCTGACGAAGCCGCGCCACCTAAAGAAGAAGATCCTACAGCGGCGCTACCTAAAAAG
AAGGCAAAGACAAAGATCGGAAACAAATCTAAAAAGAAAAGGAAGTTGAAGACGACCAGC
AAGTTTCCTGATGGTGCTGAGGGAGAGCACGAACATCAGGACTATTGTGAGGTGTGTCAG
CAAGGCGGCGAGATAATTCTGTGTGACACATGTCCACGGGCCTACCACCTCGTGTGCCTC
GACCCCGAGCTCGAGGAGACGCCGGAGGGCCGCTGGTCGTGTCCGCACTGCGAGGCCGAG
CCCGCACCCGACAATGACGACGACGATGAACATCAGGAGTTTTGCAGAATTTGTAAGGAC
GGCGGCGAGTTGTTATGCTGCGATTCTTGTCCTTCAGCGTATCATCGGTTCTGCTTGAAT
CCGCCGCTTGAAGAAATTCCCGATGGCGAGTGGAAATGTCCCAGATGCAGTTGTCCACCA
TTGGATGGAAAAGTGGCCAAAATTTTAACTTGGCGTTGGAAGGAACAGTCAAGCAAGTCC
AAGGCTCCGCGTTCAAGAGAATTTTTTGTGAAGTGGCATGAACGATCTTATTGGCACTGC
AGCTGGATATCTGAACTACAGCTCGACGTGTTCCATCCACTAATGTATCGTTACTACATG
CGTAAGTCGGATCCCGAAGAACCGCCTAAACTTGAAGAGCCCCTCGATGAACGAGATAGT
AGGTACAAACGACTCAAAGATAAACAACAGGATACGGAATCTAACAACGAAAAATTACTC
GAAGAGAAGTATTATAGATATGGCGTCAAACCTGAGTGGCTTGTAGTACACCGTGTGATC
AACCATCGCACTTCAAGAGACGGCACTACATACTTTTTAGTCAAATGGAGAGATCTCTCA
TACGATCAGGCCACGTGGGAATCTGAGCATGAAGACATTGCCGGACTCAAGCAAGCCATG
GACTATTATCAAGACATGCGAGCGTTCATAACGTCAGAGGGTAAGACTAAAGGCTTCAAA
GGTAAGAAACCAGGTCGCAAAAGTAAGAACAAAGACCTCACGGACGAAGACGACAGCAGC
GCCGGCCTACAAATGCGCCCCAAGAAATACAATCCGCCGCCTGATCGTCCTACCAGTAAT
CTCAATAAGAAATACGAAGACCAACCACAGTTTGTGTACGAAACCGGCATGCAGCTGCAT
CCTTACCAGCTAGAGGGTCTCAACTGGCTTCGGTATTCCTGGGGACAAGGCATCGACACC
ATACTGGCTGACGAGATGGGTCTCGGTAAAACCATCCAAACCGTTACATTCCTATACTCT
CTATTCAAGGAAGGCCATTCTAAAGGACCTTTCTTGGTGTCCGTGCCGCTATCCACAATC
ATTAATTGGGAGAGGGAATTCGAGCTATGGGCACCGGACTTGTACTGTATAACATATGTA
GGTGACAAAGATTCGAGGGCTGTGATCCGAGAGAATGAACTAACATTTGATGACGGTGCT
AACAGAGGTGGCAGACCTTCTAAAATCAAGTCGCAAGTGAAATTTAATGTTTTACTCACT
TCCTATGAATTGATCTCAATTGACTCTACGTGCTTAGGATCTATAGATTGGGCAGTTCTC
GTTGTAGACGAAGCCCACAGACTGAAGAGTAATCAGTCGAAATTTTTCAGGCTTTTGGCC
GGTTATCACATCAATTATAAATTGCTTCTTACGGGTACACCACTACAGAATAACTTGGAA
GAGTTGTTCCATCTTCTCAATTTCTTAAATAAAGACAAGTTCAATGATCTCGCAGCATTC
CAGAATGAGTTCGCTGACGTTTCGAAAGAAGAACAGGTGAAGAGGCTCCACGAAATGCTA
GGGCCTCACATGTTGCGACGTTTGAAAGCTGACGTACTGAAAAACATGCCTACTAAGTCA
GAGTTCATTGTCCGTGTAGAATTATCGCCCATGCAAAAGAAATATTATAAATACATTCTA
ACTAGGAATTATGAAGCTTTGAACCCCAAGAGTGGAGGTCAAACTGTTTCACTACTTAAC
GTCATGATGGACCTGAAGAAATGTTGTAATCATCCTTATCTATTCCCAGTCGCAGCGGAG
GAAGCTCCGTTAGGTCCGCACGGAAATTATGACACGCAAGCTTTGATCAAAGCTTCTGGA
AAACTCGTGCTCCTATCTAAAATGTTGAAACAATTGAAAGAGCAGGGTCATAGGGTACTG
ATTTTCTCACAGATGACGAAAATGTTGGATATACTTGAAGACTTCTTGGAGGGTGAGGGA
TACAAGTATGAAAGAATTGACGGTGGTATCACGGGAACGATCCGTCAAGAAGCCATAGAT
AGGTTTAATGCCCCGGGAGCCCAACAGTTTGTGTTCCTCTTGTCGACAAGAGCGGGAGGT
CTGGGCATCAATTTGGCGACCGCCGACACTGTTATCATTTATGATTCCGATTGGAATCCT
CACAATGACATTCAAGCTTTCTCTCGAGCGCATCGTATTGGCCAAGCCAACAAAGTTATG
ATTTATCGTTTTGTAACACGTAACAGCGTCGAAGAAAGAGTCACCCAAGTCGCTAAACGA
AAAATGATGTTAACGCATTTGGTGGTGCGACCGGGCATGGGCGGAAAGGGAGCTAACTTC
ACTAAGCAAGAGTTGGATGATATTCTTCGATTCGGTACTGAAGAGCTGTTCAAAGAAGAG
GAAGGCAAAGAGGAGGCTATTCATTATGACGATAGAGCTGTGGGTGAATTACTCGATCGG
TCTAAGGAAGGAATAGAACAGAAAGAATCTTGGGCTAATGAATATCTTAGCTCTTTCAAA
GTTGCTAGTTATTCCACTAAGGAAGGCGATGGTGAAGAGGAAGTCGATACAGAAATTATA
AAACAGGAAGCAGAGAATACTGATCCTGCGTACTGGATCAAACTTCTCAGGCATCACTAC
GAACAACATCAAGAAGATCAAGCGCGGACGCTTGGGAAAGGCAAACGTGTACGTAAACAA
GTTAACTACAACGATGGAAGTGTTGCGCAGACAGAAAACAGAGAGGATTCTACTTGGCAA
GAGAATGGCTCGGACTATAATTCCGATTTCTCTCAAGGTAGCGAGGATGACAAAGAAGAC
GACGATTTTGATGAAAAGAATGATAATGGAGATCTGCTCAGTCGCCGGAGTAAGCGTCGC
CTCGAAAAGCGAGAGGAACGCGACCGACCGCTGCCTCCATTACTGGCCAGAGTCGGCGGC
AACATGGAAGTTCTCGGCTTCAACGCCAGGCAGAGGAAGTCATTCCTCAATGCTATCATG
CGGTACGGGATGCCACCGCAGGACGCTTTCAACTCGCAGTGGTTAGTGAGAGATCTGCGC
GGGAAGTCTGAGCGCAACTTCAAGGCCTACGTGTCGTTGTTCATGCGCCATCTCTGCGAA
CCGGGCGCCGACAACGCGGAAACATTCGCGGACGGCGTTCCGAGGGAAGGATTATCCCGT
CAGCACGTTTTGACACGAATCGGGGTAATGAGTTTGATCAGGAAAAAGGTTCAGGAATTC
GAACACATCAACGGGTACTACAGCATGCCGGAACTGGTGAGAAAACCAGTTGAGCCGGTG
AAAGTGTCTGGGGCGAGTGAGAGTGCCGCCCCCAGTCCCGCGCCCTCCACCGCCACACCC
ATCACCTCCGCAGCACCCTCGCCCGCACCCACCTTGCTGCCTCACGGACAGGCAGCCACG
CCCGCCACGCCCTCTGGCTCTGACAAGGACGATAAAGAGGAAACTAAAGATGACAAATTG
GAAGTTAAAGATAAACTCAAAGCAGAACCGATGGATACGGCCGATGTCAAGGAGGATAGT
GCGGAAGAAAAAGAATCACAAAAAGAAGACGAGAAAGAGGCCGAAAGACGTATGTCCGTT
GACGAGGAACCTCCAAAAGATGAAGATAAAACTGATGAAAAGAAAGAAGGCAAAGAGTCA
CCTAAAGTTAAAGACGAATTGAAGGAAGAGACCGACAAGAAAGAGGATGTAAGAAGTGAA
AAGGCGGCATCTGACGTCTCTGAGAAACCAAAAGAGGAGAAGAAGGAGGACGACGACGAT
GACGTTGTTCTGGTTAAAGAAGAGGAAGATCTCAAAGTAGAACGTCGCAAGTTCATGTTC
AATATCGCCGACGGAGGCTTTACCGAACTCCATACTCTGTGGTTGAATGAAGAGCGAGCC
GCCGCGCCCGGCAGGGAATACGAAATCTGGCACCGAAGACACGACTACTGGCTGCTGGCC
GGAATCGTCACGCACGGATACGGTCGCTGGCAGGACATACAGAACGACCTGCGATTCGCG
ATCATTAACGAGCCATTCAAGATGGACGTCGGCAAAGGAAACTTCCTCGAGATTAAGAAT
AAGTTTTTGGCTCGGCGTTTTAAGCTTTTAGAACAAGCGTTAGTGATCGAGGAGCAGCTC
CGTAGAGCGGCATACTTGAACCTCACACAAGATCCGAACCATCCCGCAATGTCCTTGAAC
GCGCGGTTCGCTGAAGTCGAGTGTCTTGCTGAGTCCCACCAGCATCTCAGCAAGGAGTCC
CTCGCTGGGAACAAACCAGCCAACGCGGTGTTGCACAAGGTGCTGAACCAGCTGGAAGAG
CTGCTGTCGGACATGAAGTCGGACGTGTCGCGGCTGCCGGCCACGCTGGCGCGCATCCCG
CCCGTCGCGCAGCGCCTGCAGATGTCGGAGCGGTCCATCCTGTCGCGCCTCGCAGCCACC
GCAGGCAACCCCGTGCCCGCTGCCCAAATGCCGCAGTTCCCGACCGGCTTCCAGCCCGGC
GGCACGCTCCCCGGGTTCGCGGCGTCGGCCGCGACGGCGGCTAATTTCTCCAACTTCCGA
CCGCAGTACTCCGTGCCCGGACAGCCTACATCATCCTCTAACTCGAATAAATCATAAACT
CCGTAATTTAAACAACTATATTCGATTTGACGTAACCCGCAGGTAAAACATAGAATAATA
ATTTAATTCTTAGGCTAGAAGTGACATGCTTGACGGCCCGTTTAGATTTTCTCGCTGGTC
GATATGCACGTTGAAATAAATTATCGAGAGCTCAAACAATAACGTGATTATTGTATCATT
TTGTTTTAGCGAGCGGATATGTCGCCGCGTAGGTGAATTAGATGTAAGCTTTTTTGAAGA
TTCCTGTTTCCACATCGGCTCCGAAGTCATAATTATATTTGTGATTAGTTCAGATAGATT
ACATGACGTCATAGCGAAAATAACTCATAATATTATTTATTTCATCCTGATCTGTATGAA
TCTTTTCTATCGTGTAAGTGAATTGTGGACTTATGAAATCTTTATTTTTAATTTACCAAA
AATTGAAAACTGAAT
(6495 bp)

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