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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9972_c1_seq1
Scaffold_idBomo_Chr20
NCBI non-redundant
(nr)		PREDICTED:_P-element_somatic_inhibitor_isoform_X1_[Bombyx_mori]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003697 F single-stranded DNA binding
GO:0003700 F DNA-binding transcription factor activity
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0006351 P transcription, DNA-templated
GO:0006355 P regulation of transcription, DNA-templated
GO:0006366 P transcription by RNA polymerase II
GO:0010628 P positive regulation of gene expression
GO:0044822 F RNA binding
Transcript
Level		FPKM:28.87 TPM:31.63
ORF EntryO_BomoFB11156_3prime_partial:A_BomoFB_comp9972_c1_seq1
Sequence
(Nucleotide)
TGTTGTTGCTGCTGCTGCTGCTGCATTTTAGCCTGTTCAATGGCTTCGGCCTCCCGGACA
AGGCCCACAGAGCGGTAGTAGTCGATCCATTGTTGTGAATAATCCAGTTGACCCGTCGCT
GGGTTTATTGACACTTGTTGCTGCGGTCCCTGTGAGGCGGCCGGCTGGTGCCAGTGCGGG
TTGTACCCCCAGGCGGCGGGGGTGCCGCCCGTGTAGTACTCGGGGCCGGGGGTGCCGCCG
CCGCTGCCGGACCCGTTACCGTTGCCGTTGCCGTTACCGTTGCCTTCCGGGATAAAGTTG
ACAGGCCCACCAACTTTCTCCATGATAATTCGTTTACAAGTCTCAACTGCTTCTGGATGT
CCTCTGATTATAAACGTCCTTGTGTTCCTGTCATTACTCTGGCATCTCCTGTCTAGTTCG
CAGTGGGCTCCGGACTGAGCGTTTATTTGCTTTATGATTTCACCACCTCTGCCAATGACC
AGGCCGCACTTGGGTCCGTGGATGGTGAAGGTGACGCGCATCTCTGGTCGGTCGGGCCAC
TGCTGCCCGTACTCCATGCCGCCCCTGTCGCCGTTCTGCTGGCCCTGACCGCGTACTGCA
CGGCTCCGACTGTCCTCCTCACATCTTTTGACACTAGATATAAGATCTTCGATCATCTGA
CGAGCTTGATCTAGCTGATGGGGTTTCCCCTGCAAGTAGCATAGTTTATCCCCTGGTTCC
TCATCATGCTCTTGATTGAACTGGACCCTACATCCGGTGTCCGCTTGTATCTTCTTTATC
ATTTTACCCTTATGGCCGATTACAACACCAATAGCCACTTTTGGGACTAAAACCTCAGCG
GAAGTGGTGGCGAGTCCGTTCCCGGGGTCGGAGCCGCCGTAGCCGTCGTCGTAGGGGCGC
GGCGGCTCCTGCATGTCCTTGTTGGCGAGGAGCTCGAACACGAGCTGCTTCGCGTGCTCA
ACCTTGGCCGGATCGCCGGATATACGCAAAGGCTTCTCCTGCGGTTTAAATGAATTTTCA
TTAGGTCCATCCTGTATTACGACCATCTTGGCTCCAGTTTGTTCTTGGAGTTGTTTTATT
GTTTTGCCATTCTTGCCAATGATCAGGCCAACTTTGGCGCCGGGGATCATGATCTCTTCC
ATTGCATTAGGGCCTGGCCTGCTCATGTTCATTCCAGGTTCTGAAGGGTCTTGATGTTGT
GGAGCGTTCTCCCTTCCTCGATGATTCACAATTTGGTTCACTAATTCTTTAGCTCTCTGT
ATAGCATCTCTAGAACCAGTAAGCGTGCATAGCCTATCAGGATTTCCATCAGTGGGTGGT
GCCATTTGTATCTTGCAACCGGATTCTGCTTGCAGTCTGGTGATTTGTTCTCCACCACGT
CCAATTATTAGTCCAACCATACGATCAGGTACTCTGATGTATTCATTGATGCTCTGATCG
GGCAATAAATTTGTTGGTCCACTGCCAGGGCCCGCACCTGCTATCATACGTCCGCCACCA
CCAACCGCAACTGGCGATACACTGTCAACAAAATTCATAACTGGAGGTTGTGGTGTATAA
ACCGGCTCAACTGGTGCTAATTTCTTTGGTGTTGGTTCTGGTCCGTCTTCCAATGGCCTC
TTGCTACCACCACCAATCTTAGCAGCTACCTGTCTCGCACGTTGTACAGCAGTCGCGTAT
CCCGCCGTTTGACTATTATTTTGGAGCGTAGCCATAGAAGAATAATCACTCATGTTTGGA
ACAATCTGCACTTTCAACCGCGTTTTTACGCAGCCATGAAAAAAAAAAAGGTCAAAAAGA
CCTAAAACTATAAATTGAAACAAATTTACTCGCAATCTTGCGAGCCCAAAGAACGACGCG
AACCATAGACATAAAAGATTGCGTTTCAAGATGTCGTCGCCCGGCCTTTTGTTGTAAATC
AGAGATAATCTATGAGCTAATTTAATACTTTTTACGGTACCATAGACTAGTTCCTACTTA
TCAGTGCGCGTCAGGA
(1996 bp)

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