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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9948_c0_seq5
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:3.31 TPM:3.63
ORF EntryO_BomoFB11030_complete:A_BomoFB_comp9948_c0_seq5
Sequence
(Nucleotide)
CATCTATTTAAACGTCAAAGTCCAAACTGTCAAGTTCCAACCCCGGGACCTGGGGATTGT
TTATTTTTCAGTTTCAAGACCTAGATGCATATAAATTCAGCTGTAATAAAACATATATCA
ATGTGTTTCCCTGAGGTGATCAATACTGCAGGATGCGTACTTACCACCCTCTCTGTTGCA
GTTCATGAATGTAATTCGCGCAGTACGCACGTCGATATCAAAAGTACGACTGCGACCTCA
CAGAAAGTCGATTGCATCTAGTGCTAATAAAGTGCATTACAAAATGGAGGGAACGAAAAC
TATGAAGGAACTGGGATACATATTTGATTCAAATGGTCAAGTAAGAAAAATTGGAGCTGA
TGGACAGCCAACAGATGAACCATTCCAATTTGTTGTGAGCAATGATCACCAGGAATGCCA
AGCTCATTATGAAGAACTTGGCTCAGCAATCACCAATTATGTTTATGATATTCTTCAGAC
TCAGATTGGATTGCAAAAGTTACCAATCCCAAAGGATTCAAATGATGGAACATTTATTTT
TGTTTCAAAAGATTATGATAAAAAAGATGTTCTGTTAATATTGATTCACGGATCAGGCGT
TGTGCGAGCTGGTCAGTGGGCTAGATCCCTCATAATCAATGAATCGTTGGACAAAGGATC
TCAGATTCCGTATATCAAGAAGGCTTTGGCCAAAGACTATGGAGTAGTGGTACTAAATAC
AAATGACAATCACACAGCAGATGGAAAGACCATTCTCAACAGTAGCACCGCTGAGGAACA
TGCCCTTTACGCATGGCTGAACTACATATCCAATGCGAATGCAAGTTCCATACTCATTGT
AGCACATAGTTATGGTGGGGTTGTCACGGTTTCTCTGGCAGAAGAGGTGCAAAATGACTT
TGAAGACAGAGTAAAGGCCATTGCTTTTACTGACTCTGTACATTCCTATTCTAATAAGAA
GCTTACAAACTTTTTGAAACAGGTTACAAAGAATTGGATATCTAGTCAGACACCGCTGGA
TACACCTCTCAGAACTCCTGATTTCGATATAACCAGACTTTCAGCAGGTCATGAGAAACA
TGAAATGACATCATACATGTGTATGGATTCTGTTTTTAAATACTTTGATGAAATACTAAA
TATGGATTAAAACGAATATTCACGTGGTACTACTCTGTTATAATAGCGAATTTTTATTCT
CTGGTTATGTTTAAGAATGAGCATTTATTAATGTTAAATTTATGTCTATGTACCTAGTTA
GTTAATAAATAAGAATGTGTTTGTTTCAATTTATTTCTTCTTTCCTTTAGAATAATGCTT
CATCCAATATTTTATGTCCTGATTGTTGGCACGCACCCCCAAGACAGCCGATTTGGAATT
CACATCTTTCATTGCGAATGGAGAAAATCCTGCAGTATAATCAGGATCTAGAGCATTTGT
TTTGTTTCTTGCTAATTTGGTAACAAATCTTTTGTGTATATGCTGGTCTTCAGTTAAAAT
TGGGTATTGAAAATGTTGACCACCTTTTGGTGTAGGTAAACTAAATCTTTTTCCTCTTGC
TGTTAAAGGTTTACGTCCATTTATATGTATTCTTTGATTACCATCTTCATCAATACTCAC
TGCAACTTTTTTTAAAGTTGCATGACCACATTTAGGACAGAACAGTTTTGTCATTACACT
AGTTGTTTTGAAACAGGTTGTGCAACGAAAAATAAATGTACGTAATTGTCTTATAATTCT
TCCATCTATTGATGTAACATTTAGTCCTATCTGCTTTAAAACATTTTGCATTGCAAAGTC
CGAAGTGATGCAGGCAACTTCAACATCTTTTTCTTTGAATTCACCAAGTTCCATCTCTTT
TCGTTTTTCAGCCAAATTTTTGGTTGTGATCCATTCTCCACCATCGCTATCTGTCTCGTC
TTCATCATCATCATCATCATAGCTGTCTGTAGCCTCTTCATCAGAGACTTTAACCATTAG
CTCATCAACTTTGTCATCTTTCAAATCCATATCATTGATTTGTTTTGAAATTTCTTCAGC
CAGTTTATCATCATCAGTTTCATTTGTTGTTGTTTGACAGTTTTGTTGGTGTTTGACTTC
AAATGACTCTCCAGTTTCAACATTCACAGTCTCTCCTATGGGTTGTTGTAAAGGTTCACT
GGTCTCTTTGTTATTGTTTGCATTAGAGTCTTTCTCACCTGTTTCCTGATTGGCATTTTC
ATAATTGGGATGAAGGTTAAACCCAGCCAATCCTGTAACTTTAACAGATTTTTGCATAGT
CGGTTCATCTTTGAGATGTTCCGTACCGCCAACCTTCTCCTTCTCTAGCTGGTAGGTCAG
TGCCATAACCTTAATATCTGTAGCAGAGAGGCTAGAATAATCACCTGTTTTCTTCGAGAA
TTCAGTAATGAATTTTATGTTATCTGCGAAGACATCCTTGACTTTTAAGTCGTATGGAAG
GACAACGAGCTTTTTTCTTTGCCTATCATTAGTTATTTCATCAATAACCTCTTGTATAGT
ATAAACATTTTCAGCAATGTCTTGAAGGTTTGCCGCCCTTATGAATGCAGAGGTATCCAC
AATCAGATGCTTGATAGACTTCGGCATTGCGCTGAACACTAATCACGATATTAACTTTAC
ATGTGTATAATTCGTTATGCAAAACGAACTTGTTTAGCTCACGTGTGAA
(2689 bp)

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