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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9948_c0_seq2
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		PREDICTED:_LOW_QUALITY_PROTEIN:_RNA-binding_protein_NOB1_[Bombyx_mori]
Ontology
GO:0000469 P cleavage involved in rRNA processing
GO:0004521 F endoribonuclease activity
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005737 C cytoplasm
GO:0007601 P visual perception
GO:0030490 P maturation of SSU-rRNA
GO:0030688 C preribosome, small subunit precursor
GO:0042274 P ribosomal small subunit biogenesis
GO:0046872 F metal ion binding
GO:0090502 P RNA phosphodiester bond hydrolysis, endonucleolytic
Transcript
Level		FPKM:7.84 TPM:8.59
ORF EntryO_BomoFB11027_complete:A_BomoFB_comp9948_c0_seq2
Sequence
(Nucleotide)
CATCTATTTAAACGTCAAAGTCCAAACTGTCAAGTTCCAACCCCGGGACCTGGGGATTGT
TTATTTTTCAGTTTCAAGACCTAGATGCATATAAATTCAGCTTTCATGAATGTAATTCGC
GCAGTACGCACGTCGATATCAAAAGTACGACTGCGACCTCACAGAAAGTCGATTGCATCT
AGTGCTAATAAAGTGCATTACAAAATGGAGGGAACGAAAACTATGAAGGAACTGGGATAC
ATATTTGATTCAAATGGTCAAGTAAGAAAAATTGGAGCTGATGGACAGCCAACAGATGAA
CCATTCCAATTTGTTGTGAGCAATGATCACCAGGAATGCCAAGCTCATTATGAAGAACTT
GGCTCAGCAATCACCAATTATGTTTATGATATTCTTCAGACTCAGATTGGATTGCAAAAG
TTACCAATCCCAAAGGATTCAAATGATGGAACATTTATTTTTGTTTCAAAAGATTATGAT
AAAAAAGATGTTCTGTTAATATTGATTCACGGATCAGGCGTTGTGCGAGCTGGTCAGTGG
GCTAGATCCCTCATAATCAATGAATCGTTGGACAAAGGATCTCAGATTCCGTATATCAAG
AAGGCTTTGGCCAAAGACTATGGAGTAGTGGTACTAAATACAAATGACAATCACACAGCA
GATGGAAAGACCATTCTCAACAGTAGCACCGCTGAGGAACATGCCCTTTACGCATGGCTG
AACTACATATCCAATGCGAATGCAAGTTCCATACTCATTGTAGCACATAGTTATGGTGGG
GTTGTCACGGTTTCTCTGGCAGAAGAGGTGCAAAATGACTTTGAAGACAGAGTAAAGGCC
ATTGCTTTTACTGACTCTGTACATTCCTATTCTAATAAGAAGCTTACAAACTTTTTGAAA
CAGGTTACAAAGAATTGGATATCTAGTCAGACACCGCTGGATACACCTCTCAGAACTCCT
GATTTCGATATAACCAGACTTTCAGCAGGTCATGAGAAACATGAAATGACATCATACATG
TGTATGGATTCTGTTTTTAAATACTTTGATGAAATACTAAATATGGATTAAAACGAATAT
TCACGTGGTACTACTCTGTTATAATAGCGAATTTTTATTCTCTGGTTATGTTTAAGAATG
AGCATTTATTAATGTTAAATTTATGTCTATGTACCTAGTTAGTTAATAAATAAGAATGTG
TTTGTTTCAATTTATTTCTTCTTTCCTTTAGAATAATGCTTCATCCAATATTTTATGTCC
TGATTGTTGGCACGCACCCCCAAGACAGCCGATTTGGAATTCACATCTTTCATTGCGAAT
GGAGAAAATCCTGCAGTATAATCAGGATCTAGAGCATTTGTTTTGTTTCTTGCTAATTTG
GTAACAAATCTTTTGTGTATATGCTGGTCTTCAGTTAAAATTGGGTATTGAAAATGTTGA
CCACCTTTTGGTGTAGGTAAACTAAATCTTTTTCCTCTTGCTGTTAAAGGTTTACGTCCA
TTTATATGTATTCTTTGATTACCATCTTCATCAATACTCACTGCAACTTTTTTTAAAGTT
GCATGACCACATTTAGGACAGAACAGTTTTGTCATTACACTAGTTGTTTTGAAACAGGTT
GTGCAACGAAAAATAAATGTACGTAATTGTCTTATAATTCTTCCATCTATTGATGTAACA
TTTAGTCCTATCTGCTTTAAAACATTTTGCATTGCAAAGTCCGAAGTGATGCAGGCAACT
TCAACATCTTTTTCTTTGAATTCACCAAGTTCCATCTCTTTTCGTTTTTCAGCCAAATTT
TTGGTTGTGATCCATTCTCCACCATCGCTATCTGTCTCGTCTTCATCATCATCATCATCA
TAGCTGTCTGTAGCCTCTTCATCAGAGACTTTAACCATTAGCTCATCAACTTTGTCATCT
TTCAAATCCATATCATTGATTTGTTTTGAAATTTCTTCAGCCAGTTTATCATCATCAGTT
TCATTTGTTGTTGTTTGACAGTTTTGTTGGTGTTTGACTTCAAATGACTCTCCAGTTTCA
ACATTCACAGTCTCTCCTATGGGTTGTTGTAAAGGTTCACTGGTCTCTTTGTTATTGTTT
GCATTAGAGTCTTTCTCACCTGTTTCCTGATTGGCATTTTCATAATTGGGATGAAGGTTA
AACCCAGCCAATCCTGTAACTTTAACAGATTTTTGCATAGTCGGTTCATCTTTGAGATGT
TCCGTACCGCCAACCTTCTCCTTCTCTAGCTGGTAGGTCAGTGCCATAACCTTAATATCT
GTAGCAGAGAGGCTAGAATAATCACCTGTTTTCTTCGAGAATTCAGTAATGAATTTTATG
TTATCTGCGAAGACATCCTTGACTTTTAAGTCGTATGGAAGGACAACGAGCTTTTTTCTT
TGCCTATCATTAGTTATTTCATCAATAACCTCTTGTATAGTATAAACATTTTCAGCAATG
TCTTGAAGGTTTGCCGCCCTTATGAATGCAGAGGTATCCACAATCAGATGCTTGATAGAC
TTCGGCATTGCGCTGAACACTAATCACGATATTAACTTTACATGTGTATAATTCGTTATG
CAAAACGAACTTGTTTAGCTCACGTGTGAA
(2610 bp)

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