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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9942_c0_seq1
Scaffold_idBomo_Chr24
NCBI non-redundant
(nr)		PREDICTED:_irregular_chiasm_C-roughest_protein-like_isoform_X3_[Bombyx_mori]
Ontology
GO:0001745 P compound eye morphogenesis
GO:0005515 F protein binding
GO:0005886 C plasma membrane
GO:0005913 C adherens junction
GO:0007155 P cell adhesion
GO:0007156 P homophilic cell adhesion via plasma membrane adhesion molecules
GO:0007409 P axonogenesis
GO:0007520 P myoblast fusion
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016202 P regulation of striated muscle tissue development
GO:0030165 F PDZ domain binding
GO:0042802 F identical protein binding
GO:0045177 C apical part of cell
GO:0046331 P lateral inhibition
GO:0046666 P retinal cell programmed cell death
GO:0046667 P compound eye retinal cell programmed cell death
GO:0048749 P compound eye development
Transcript
Level		FPKM:3.91 TPM:4.28
ORF EntryO_BomoFB11012_complete:A_BomoFB_comp9942_c0_seq1
Sequence
(Nucleotide)
CGCTTAAACCAAATAGCCTTTTACGACTTGATATGACCTTTGTCGCTTGATTATATGTAT
TATTGAGCAAAAGCGTCTGCCGTATCGCGATTGTCTCACAAATAAAACATTAATTAACTA
AAAACAAATATACATTGCCGCCTCGCATTGTATCGAAAACAAGGATTGCGTCAGCAGTCC
ACTGCAGCCGCGGAGATATAGCGACGTATAGCTATAGAAGTATAGCAGTGATTAAAAATG
ATTTTAACACGATGTTATTTTTCGTCGTTTTTAATTCTCACAATTAAAATATAGAGGTCT
TAAACAGGAATTTAGTTATTTTTGTTTTTAATGCATCAAGTCTTTCGAAGTGATTCAATG
GAGCGTGTCTGGGTCAAGACACCGTCCGCCGGTCCACCGCTGTGGACCTGAAGGGACATG
TAGTCTAGGGTCAGCAACTGACGTGAGGCGTTAGGGCATCACCAGTGGCGTGACTTAGCG
AAGCCGCTGGACCAAGGGAATTCACTGACGAGAATATTTATAATTCACGAGCACGATTCT
TCACTGTACGAAGATTCGTTGGTGTCCCTTGACGTTGTCCGCCATGTTTATATTCCCATT
TTTTCTTTATATATTTGTATTTCCCGGGAGCAGCGTTCCGCCTACACGTGGGTGGCCTGG
GCGGGACCGCCATTACCTGTCGGTGCGGAATTCCTGACGGCGGAGTATGGCGGCGGTGCG
GGCGTGGCCGCGGGCTTCGCCGTGTGCACCTGATTCCCGTAACCTATTGAACTATTCCTT
AAGTATGGATTACCGTAGGTAGCCGAGTACCGCGGGTCGACTGCAGTCTGCGGTCTAGGG
TTCGGTTGCGCATAGATTGGCGTTTGTGGACCCTCTCCACCAGAGGGTAGACCTAAATTG
TTGATGGCGTCGCTTTCCTCGGGCTTGTTCGTTCGTTGCAACGTATTATTTTGCGATCCA
TTGCTGTTTGACAATGGGAGAGTCGACGCCGTGTCTATACTGCGCGTCAAAGATCCCTGT
TGCGACCTGGCGTGCGGCGGGGGGGAATGCACGTGCAGGTGCGCCGGGGGCGAGTAGCCG
TGCGGGTAGTCGTACACGAACCCGGCTGGAGTCTTATAACCATAGTCGTGGTAAGCGGGG
TCAGTATAGTCATTGTTGTAATTGAAGTCGTCTAGTCTGATGTTAGGTAGAGGTACCGGA
CCAGCCAGGGGAAGCCCTACCGGCGCCTTGGTGTCCGAGCGATCAGAGCTCGTGTAATCC
AGGTCGTAGCTGGCGTCGCTCTGCGGCAACTGAAGCTTCAGGTCGCTGATGTTAGAGCTC
CTGTCGCTCTCTTTGTACGCGTCTCCGGTCGCGACGGTCACGTCCGGCTTCTCGTTCATT
TGACTCTTCTTCCTTCTTCTCCTGTGGCAGACCACGAGGAGAATTATGAAGGAGGAGAAG
ACGACGATGCCGGTCGTAACCCCGATGAGGATTATGTACAGTGGAAGGGTCTTTAAAGGC
TTCAACATTATCGGTGCGTTTGCGTTACCGTATTCGTTCGTAACGCTGCAGTTGTAAAGT
CCAAAATGCCTTGACTGGCTAGCCTTGATCACCAAACTAGATTTAACTAGTCCATCGGGC
AATGATTCTTGCAGTATCGCGTAATTCGGATCCTGTATCACACTGATCTCCCGACCTTCG
AAGAACCATTTGATGAAGTCTGGCTTGGGAACAGACTCTGTCAGGCATTCAACTGTAACC
GTCTCCCCTTCCGCGCCTATCTGAGTCCTATTCGAAATTATCTTTGGAGCTCCTTTAATA
AAAACAGTAGCTTCACTCTCGATTTCTGGGTATCCGGTGACACTCGCTTTGCAGATATAT
TTTCCTGCCGTTTCTTTGTTCACAACTATCTCCAAGTTCGGGGATTTTCCTTTAACCCCG
ATCCTGCCAGGCTCGTTCAGAAGCCACCTGATCGCCGGCTTCGGCTGCCCATCAACGTCA
CAGCTAAGGGTCACAATCGAGCCGATATCCGCCTCGACGTCATGCAGATGATTGCGGAAA
ATTGGAGGATATGCAACGTTCAGTGTAACTTTTGCCGAGCTCGTGCCCACAGTATTGCTG
ATTTCGCATCTCACTTCAGCCTTGTTATGTTTCCTTGTGACGTTGAAAATAATCATCTCG
TCAGTGTAGTCTCCTATGACCGGGTTGTTGTTGATGTACCACCTGTGGGCCCGGGGGGGA
GGATTCGATTCGGAGCTACACCGTATCCTTGCTTCATTACCCTCCGGTATCTTACCGTCG
ATCACGCCAGACCTGAACGATATATTCACTTTCGGGACGTATTTCACCTCAAAATGTATC
GTAGCCATCCTCGGCGCTCTGTCAGCTGTGTTCTGGGCTTGGCAGGTGAATGTCTGGTTG
TGGTACGCCTTGCTCGGGTTCAACCGCAAAACCGACCTTGTTTTGTATCTTTGTCCATCT
GCCATCAACTCCAATTTACTCTTCACGTTCTTCTTCACCACAGCTTGGTTACCGTCCAGC
CAAGTTATCTCGGCAGCCGGTTTTCCACCTACGGATTCGCATTCGATATCAAGAGATTGA
CCTTCCGTTGCTTCTACGAAGGCACCTTGAATTATCCTCGGAGGCTCAGGAGCTACTAGG
ACTGTCAGTTTTGCGTACCGCGATCGGATCGCCGGCTCTCCATTTAGCCCGCCACTAACT
TGGCATTGGTACCTTCCGTCATCTTCTAAAGTAACGTCTCGTATATCGAGGGAGAAATCT
TCCTCGTCGCTTCCGATCATGGAGTATCTGTCATAACCGCTCAGGTTCCGGTGTGTGCCG
AGCCCGAAGTCGTCTTTCGTCCACTGAAGCGCCCCAGCCTTGTTCTCCACTCGACAGGGC
AGAGTGACTCGCGATCCCACTATCGCACTCTGATCTTGCGGCTCCATGGCGAATCTCTGT
TCCTGGTAACCATGACAACCGACAACGCAGACAATAAAAAGCAGGATCCGTATCCCGGCA
TCCGACGTCCATATCCGTTTCCCTCCCGCCACCGTTCTAAAATTAAATCTCGCACTCGGG
ATGCGCGCCCGCAACTTTAAATGCTGTTTATTTCGGGAGTAGCTTTTGTCTGCCGCCATG
TCAGTTTGTCTCGATGGGGCATGTTTCTGAAAGCTCGAGTGAAGCTTTCCTCATTTCCTT
GATTTTCGTATGAATACTTCGGTAATAAAACTCTTCTCAATATTCCAAATCGAAATCGAC
GAACACCGAATTAAATCACCAAAAAAAATAAATTATAATCAACTATTCTAGAACACAATA
CAATTAATATTTCGTTCGATATAATTTCGTAAACCGAAAATCGGATTGTCGGAGACCGAA
TCTTTGGTTTTTCGTGAACGCGCGTACCCGGGGACGGACGACGAGACGTGACTAACCCGC
CGTGCG
(3426 bp)

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