SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9924_c0_seq3
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_nuclear_RNA_export_factor_1_[Amyelois_transitella]
Ontology
GO:0000166 F nucleotide binding
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005635 C nuclear envelope
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006378 P mRNA polyadenylation
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0007616 P long-term memory
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0030534 P adult behavior
GO:0031965 C nuclear membrane
GO:0044822 F RNA binding
GO:0047485 F protein N-terminus binding
GO:0051028 P mRNA transport
GO:0051168 P nuclear export
Transcript
Level		FPKM:4.72 TPM:5.17
ORF EntryO_BomoFB10944_complete:A_BomoFB_comp9924_c0_seq3
Sequence
(Nucleotide)
CTGCATTTCTTAACGTATTCTTATATCGTAGCCCTATGCTTTCCCCCCACAGCGCACGAG
AAGGCAGCGCGTTCGCAAACAAAACACGACCAAGCGTCAAACGTCTTCGATCTAAACATA
ACATTCATTCGACCACACGACTAGCCCACAAAATAATTTATTAAGGGGTTCCGTCGTAAT
CGCATTGAACCGTGTCCATTGCTTCACGCACTCTGGACTATTTGCTGGCTTTGCAAGAAA
AACAAGCAATGTAATCGACGCGACAGCCTGCCGGTTTGTGCAAAAAAATCGTTAACCGCC
ACGAAGCGCCATTATAATTTGGTAGCCCCCCAAATCTAAATTTAAATGTATATACAAGAT
TCGAGTTTCGAATATCTGTTCTTTTTTCTTTTCTTTTTTTCACATTATTTTTAATGAATT
AAATTTAAAATTCACAACAATTTATACACTGATGAACAACTATTTACGTAATATGTACAT
CGGAACCAAAGCTAACACTAACAAACTTAAAAATATCTAATTAGTATAAGCAACAAGTAT
CATGGTGATATTAAATGTATTTATTACAAATTAAAGTCAACGCCATAAGATTAGATGTTT
TTTTAGCTCAAGTTAAGAGCTGGTAAAAATGGTACATCAGTTCCGTCTCTCATGCTATCA
AAGATATCAGAATTAACTTACAAACAGCCAATCGGTGGCACACTATGTTCTTTTTCAATC
CAAACTTTAGCATTTTAATTGAAAACTTATACAAACTTCGTCTTTAGTAACATTCTTAGA
ACAACATATTCTTTTAATTTTATTTTAATATTCATTGAATACAAATGTATTTTAGAATGA
CATTAATATACAGAATACTACAAAATGTTTAGTGTTTTAAACTTACACATGTTTTATTTA
GACATGTTCAATATTAGGCATTTAGACAAGTCTTATTTTGTTCAAACTCCAATTTGATTA
GTATATTAATTTTGCACTTTATGAGAGTATTATAACATACAATTGCATTAGATTGCCTCT
TTTATTTAAGCCCATATACGAAGAGAGCAAATTTAATTTCTTTAGTAAACACTTAGGGTT
CATTTCACAATTTCATTTTATTCAAATACAGTATGTGTTTACGAGCGTGACGTTAATGAA
CCTTAAGGCTTTTTTCATGGCTACGATTCGTGAAAGCATCATACAAACTCACTGATCTCT
TATTACTTGGGCAGTTATACTTGGCAAGAGAGAACAAGGCACGGTAATAACAATAACGTG
TGCGCTCAAAGAATACTGCGCAATGGAGGACTATGCTTTCAGATTTAACAAGTCAACTAT
TGCACACGCCACTTAGCAGTGTTTGCTTGAATACAATTCTGCATAAATTCAGACGGTAAA
CGCACAGGTAATACGAAGTATTTAATTACAGCAAGAAAACACAGTTGTCCCAATGTAGAT
GGAACATAAGGTAACTGATGAGAGTTAACACGATTTTACATATAATGCATTTATAGTGGT
ACAATAGGAGCAATGTATGTAAAAATATTTCAATGGTGTATTCAAAAAAGTAAGATCGCG
TAAATTCTCTTTACAATATAAAAATGTAATCACGAAATCGGATCCATAAAATCGAATTCG
ATTGTAAATAAAACAACAGTTCTCTTTCAACCCTGCTTCGCGTAAGACTATTTGTGAAGC
GATATTTTCGATTTTATGGTTCTAATATCGAGATCATGTTCATTCGTTTTTAATTTTTGT
ATTTGACAGAAGTATATATACTTCTATGATATGTATATACTTTTGTGATAAATAAAAAAT
AAAAAAACCTAATTAATGAATCGTAGACACCAATATCTACTCAGAAATTGTTGTAATTCT
TGTCTAATCCAAACCACCATAAAACATAAATTTTAGATTGGATGCCATGGAGGGGCAAAC
ATTTTGCAGATGATAAATAATTTGGTACTATAATTTCTACAGTAATTTGTTTCAGCATAA
ATTTCAACTATTACAGAAAAAAACTTATTTAAAACTTATTTTGGTAATAGATAACTCTTC
GGTTTTGTATTGTTTCCATCTTTTAAAAGCATTCTTGACTTTCTTCTGTAAACCATTATT
TTCTTATTCTTCTAAAAAGTTTGTACACAAACATGTACTTCCTTAAAGTAATTCTCTTCA
CATAAACTGCATATCCATTGCCGACTCAGACATACATTCCTCATTTTATGACCATTCACT
TTGTTGTGTAGATTTTTTATTCCAACACCAACAAAAACATTTTCAATTCCATATAATCTT
CTGATAATTCTATAAAATATCTCACTATTTCACTCTTTTCACTATTTACAAAGTTCTAAT
TTAAGCTCCAAATGTTTTTCATATTCATTCACTTTACAAAGGCTTCAGGCGGTATCTTGC
CTTCGGAGTGTAGTTGATTAAAGATGAACATAGCCCTTTGCAAATCCCAGCCAGTTTCTT
GAAGACAATTGATACTCCAATGCTCATTCATTCCAGTTTGTTGACCAAGCATGTTGAGTA
GCTGCATCTTCTGAGAATCATCTGGCGTCCCAGCTGCGAGCGTGGGAGTAGGAGTAGGCG
TGGGCGCTGGAGTAGGTGGAATCGGTTCTACAGTACCCGTTGAAAAGGCCTTATCCTCCT
GTTCTTTAGTAGTATTCGTGATATATAACATATCGTTGATGATTGAGAAGCCGCCATTCG
CATTTGAAACTATCACGAACGTCCGATGAAACGAACGCATCGGGTTATTGGGAGTGTTCG
TTTCTTTGAACACACCGTTCATTGTAAGGACGATCATGGCCGGAGTAAAGACTAGTAAGT
CGACAGCAAAACCCATTAAATCGTGTGTTGTTTTTGGCAGATCTGATAGAAAGGAGACTA
CTTGCAGCTTTCCGGTACGTAGGTAACGCCTTCTCGACTCCCTTTCTGTTATTCGGGTTA
AATTACGGCTGTTCGATATGTAAGAGTTTAACCTAGTTGTCGTAGAATTCCTGCTGTCAT
TAGTTAAATAATTTGCAGCCATCGACATTGTAGCATTTTCATGGTACGCCTCTAGAAGTG
GTTGCCGAGATTCCGAGTCGTATATCGCATAGTATTGAGTGAGAAACTCCCTGACAAGAT
CCTGACCCGCCGGGTCTACCAGGAACGATTGTTGCCGAGGGGGAAGTCCCATATCTTCAG
CTACGTCGAATCCAATAGCCGGTGGAAGATCCGCGCCATCCAATCTTGTCAGCTTGGGAA
ACTTCTTCCGGACATCACTTATGTAGATTTCGTGATCATGAAACCTGTTCACCAGTGGGT
TTCCTTTGAGGTATAGCTCAACTAGCGGTAATGATCTGATTGGGTCCAGTGATCCAAGGA
ATGGAATCCTATTATCGCCCATATACAATATTTTCAAATTCTTGAGCTTTGAAGACAAAA
CCTTGAGATGCTGCAAACCATGAAGCTTATTATCATTTAGGTTCAAAGCTTCTATGTCTG
GAATATTCTCTGCTATTATATCTATAGCAGCCAACATTATCATTGGACGGAACAGTGCAC
AAAATATATCTTCTAGATCTGGATCAGCATGGAATTTTGTTAAATCTAATGCCTTAGTTG
TAGCATTATACCTCTTCGCCATTGTCAATTTCATCTTCTCTTTCATGGCAGCGTCAATGG
CCATGTTTGGAACAGCATTCCTCACAATAACAATTAACTTAAAACCATCTGACATAGTGA
TCTTTCTATCAGCATTATAAAGTTTTTCAGCTGTTTTGACATCATCAACATAGAATACTG
CAGCATTTCCATTGACTTTATAGTAATGTGGAATGAATATGTCGGGTGAAAGAAAACCCA
ACAAGGCTCGGAGGATAACATCTTTTTCATGTTTTGCTCCATATGGAATGATTATTTGGT
ACCAAGGCAGTACACCAGGAATAAATTTCTTTTTAGTGTGTCCGTGGCTTCCTTGCGGAG
CTGGAGAGTACATTCTCCCACGTCCCCTGAAAGAACTTTTCCGGACCGGTCCTTGAAGAG
CAGAACTACCCATGTCAATATCATCATCAAGGAGGGCTAAAGGATTTTTCCAAGTTCGAA
ATTTATTTTTTCCTTTAGCTCCAGGTTTAAAACTGACATGTCTCGGCACACTATTGACAC
GGTCATCGTGTTCAAAATGGTCAGTATCAGCCTTCCAATTTCTATTCCTTCCACCGCCAC
GTTTTGGCATCGTGTCGAAGAAGCTTTAATCACCAGTATACAAATACCGTGAAAGTAGTT
CTTTAAGGTTTCCTTATTTTCTCACATGCGTGTAGAATAGTTAACTGAGATAAAGCCAAT
GATAATTGAATAATAGCTTTTTTTAATTAACAACGCAAATTACAAAAGAGTTAAACAACT
TTGATGGTGTAAAATTACCCTACACTCAATAAATTTTAAGTATG
(4424 bp)

- SilkBase 1999-2023 -