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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9924_c0_seq1
Scaffold_idBomo_Chr18
NCBI non-redundant
(nr)		PREDICTED:_nuclear_RNA_export_factor_1-like_[Plutella_xylostella]
Ontology
GO:0000166 F nucleotide binding
GO:0000346 C transcription export complex
GO:0003723 F RNA binding
GO:0005515 F protein binding
GO:0005622 C intracellular anatomical structure
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0006406 P mRNA export from nucleus
GO:0006810 P transport
GO:0008150 P biological_process
GO:0016607 C nuclear speck
GO:0016973 P poly(A)+ mRNA export from nucleus
GO:0044822 F RNA binding
GO:0051028 P mRNA transport
Transcript
Level		FPKM:1.58 TPM:1.73
ORF EntryO_BomoFB10942_5prime_partial:A_BomoFB_comp9924_c0_seq1
Sequence
(Nucleotide)
CTGCATTTCTTAACGTATTCTTATATCGTAGCCCTATGCTTTCCCCCCACAGCGCACGAG
AAGGCAGCGCGTTCGCAAACAAAACACGACCAAGCGTCAAACGTCTTCGATCTAAACATA
ACATTCATTCGACCACACGACTAGCCCACAAAATAATTTATTAAGGGGTTCCGTCGTAAT
CGCATTGAACCGTGTCCATTGCTTCACGCACTCTGGACTATTTGCTGGCTTTGCAAGAAA
AACAAGCAATGTAATCGACGCGACAGCCTGCCGGTTTGTGCAAAAAAATCGTTAACCGCC
ACGAAGCGCCATTATAATTTGGTAGCCCCCCAAATCTAAATTTAAATGTATATACAAGAT
TCGAGTTTCGAATATCTGTTCTTTTTTCTTTTCTTTTTTTCACATTATTTTTAATGAATT
AAATTTAAAATTCACAACAATTTATACACTGATGAACAACTATTTACGTAATATGTACAT
CGGAACCAAAGCTAACACTAACAAACTTAAAAATATCTAATTAGTATAAGCAACAAGTAT
CATGGTGATATTAAATGTATTTATTACAAATTAAAGTCAACGCCATAAGATTAGATGTTT
TTTTAGCTCAAGTTAAGAGCTGGTAAAAATGGTACATCAGTTCCGTCTCTCATGCTATCA
AAGATATCAGAATTAACTTACAAACAGCCAATCGGTGGCACACTATGTTCTTTTTCAATC
CAAACTTTAGCATTTTAATTGAAAACTTATACAAACTTCGTCTTTAGTAACATTCTTAGA
ACAACATATTCTTTTAATTTTATTTTAATATTCATTGAATACAAATGTATTTTAGAATGA
CATTAATATACAGAATACTACAAAATGTTTAGTGTTTTAAACTTACACATGTTTTATTTA
GACATGTTCAATATTAGGCATTTAGACAAGTCTTATTTTGTTCAAACTCCAATTTGATTA
GTATATTAATTTTGCACTTTATGAGAGTATTATAACATACAATTGCATTAGATTGCCTCT
TTTATTTAAGCCCATATACGAAGAGAGCAAATTTAATTTCTTTAGTAAACACTTAGGGTT
CATTTCACAATTTCATTTTATTCAAATACAGTATGTGTTTACGAGCGTGACGTTAATGAA
CCTTAAGGCTTTTTTCATGGCTACGATTCGTGAAAGCATCATACAAACTCACTGATCTCT
TATTACTTGGGCAGTTATACTTGGCAAGAGAGAACAAGGCACGGTAATAACAATAACGTG
TGCGCTCAAAGAATACTGCGCAATGGAGGACTATGCTTTCAGATTTAACAAGTCAACTAT
TGCACACGCCACTTAGCAGTGTTTGCTTGAATACAATTCTGCATAAATTCAGACGGTAAA
CGCACAGGTAATACGAAGTATTTAATTACAGCAAGAAAACACAGTTGTCCCAATGTAGAT
GGAACATAAGGTAACTGATGAGAGTTAACACGATTTTACATATAATGCATTTATAGTGGT
ACAATAGGAGCAATGTATGTAAAAATATTTCAATGGTGTATTCAAAAAAGTAAGATCGCG
TAAATTCTCTTTACAATATAAAAATGTAATCACGAAATCGGATCCATAAAATCGAATTCG
ATTGTAAATAAAACAACAGTTCTCTTTCAACCCTGCTTCGCGTAAGACTATTTGTGAAGC
GATATTTTCGATTTTATGGTTCTAATATCGAGATCATGTTCATTCGTTTTTAATTTTTGT
ATTTGACAGAAGTATATATACTTCTATGATATGTATATACTTTTGTGATAAATAAAAAAT
AAAAAAACCTAATTAATGAATCGTAGACACCAATATCTACTCAGAAATTGTTGTAATTCT
TGTCTAATCCAAACCACCATAAAACATAAATTTTAGATTGGATGCCATGGAGGGGCAAAC
ATTTTGCAGATGATAAATAATTTGGTACTATAATTTCTACAGTAATTTGTTTCAGCATAA
ATTTCAACTATTACAGAAAAAAACTTATTTAAAACTTATTTTGGTAATAGATAACTCTTC
GGTTTTGTATTGTTTCCATCTTTTAAAAGCATTCTTGACTTTCTTCTGTAAACCATTATT
TTCTTATTCTTCTAAAAAGTTTGTACACAAACATGTACTTCCTTAAAGTAATTCTCTTCA
CATAAACTGCATATCCATTGCCGACTCAGACATACATTCCTCATTTTATGACCATTCACT
TTGTTGTGTAGATTTTTTATTCCAACACCAACAAAAACATTTTCAATTCCATATAATCTT
CTGATAATTCTATAAAATATCTCACTATTTCACTCTTTTCACTATTTACAAAGTTCTAAT
TTAAGCTCCAAATGTTTTTCATATTCATTCACTTTACAAAGGCTTCAGGCGGTATCTTGC
CTTCGGAGTGTAGTTGATTAAAGATGAACATAGCCCTTTGCAAATCCCAGCCAGTTTCTT
GAAGACAATTGATACTCCAATGCTCATTCATTCCAGTTTGTTGACCAAGCATGTTGAGTA
GCTGCATCTTCTGAGAATCATCTGGCGTCCCAGCTGCGAGCGTGGGAGTAGGAGTAGGCG
TGGGCGCTGGAGTAGGTGGAATCGGTTCTACAGTACCCGTTGAAAAGGCCTTATCCTCCT
GTTCTTTAGTAGTATTCGTGATATATAACATATCGTTGATGATTGAGAAGCCGCCATTCG
CATTTGAAACTATCACGAACGTCCGATGAAACGAACGCATCGGGTTATTGGGAGTGTTCG
TTTCTTTGAACACACCGTTCATTGTAAGGACGATCATGGCCGGAGTAAAGACTAGTAAGT
CGACAGCAAAACCCATTAAATCGTGTGTTGTTTTTGGCAGATCTGATAGAAAGGAGACTA
CTTGCAGCTTTCCGGTACGTAGGTAACGCCTTCTCGACTCCCTTTCTGTTATTCGGGTTA
AATTACGGCTGTTCGATATGTAAGAGTTTAACCTAGTTGTCGTAGAATTCCTGCTGTCAT
TAGTTAAATAATTTGCAGCCATCGACATTGTAGCATTTTCATGGTACGCCTCTAGAAGTG
GTTGCCGAGATTCCGAGTCGTATATCGCATAGTATTGAGTGAGAAACTCCCTGACAAGAT
CCTGACCCGCCGGGTCTACCAGGAACGATTGTTGCCGAGGGGGAAGTCCCATATCTTCAG
CTACGTCGAATCCAATAGCCGGTGGAAGATCCGCGCCATCCAATCTTGTCAGCTTGGGAA
ACTTCTTCCGGACATCACTGGAGAGAACAAACATTATGGAAACATGTTTCAAATTTGAAC
TCTGAAACTCATAATCGTTAAG
(3322 bp)

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