SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9911_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_5_[Papilio_xuthus]
Ontology
GO:0004197 F cysteine-type endopeptidase activity
GO:0004843 F thiol-dependent deubiquitinase
GO:0005515 F protein binding
GO:0005764 C lysosome
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0008242 F omega peptidase activity
GO:0008270 F zinc ion binding
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0036459 F thiol-dependent deubiquitinase
GO:0043130 F ubiquitin binding
GO:0046872 F metal ion binding
GO:0071108 P protein K48-linked deubiquitination
Transcript
Level		FPKM:13.22 TPM:14.49
ORF EntryO_BomoFB10893_complete:A_BomoFB_comp9911_c0_seq2
Sequence
(Nucleotide)
GGTTGCAAAGGCATACCTTAAGGCAAAAAGTTAAGCGTTGTATGTCAGTATGACAATATG
TATACTTGACGTAATATAAAACTCTTTTAATGACAGAGGCAGTGCACACATTTGTGCCTC
TGGTAAACTTAAATTATCATTGACGAAAATAATAATTTATACCTTACTTTTTTATTTACT
AAATAAATAATACCTAATTTTGTTATTTTTGTTAAATCTCTTACATTTTCAAACAGTCTA
ACAAGCCAATACGTATTTGGTTGTATATATCAATGACTCTGAAATCATAGCCTCTCATAT
AAATATAAATAACCAAGATCTTTGGGCGGATTCTCTGAGAGAGCAACCTTATTGTCGTTG
AATATGACCCATCTTCCTTCATGGAGTATGTGACACACATAATGACCAACCATTGTAGAA
GTGCCCATATGGGATATAAATGCTATCAGTTTGTATTTTTCTGGTCCGTCCCTACATCCA
AGTGTCCTGTCAGGTCCCGGGGTGGGTTCATCCAGGTCGAGTTGATCAGCGCGACTGAAG
ATCCAGTCAAGCGCTCGTGTGACGTCACCGCCCGTGGCCCCAAGCGCGCGGACTACCTGA
GCCCGAGTGAATCCCATACTCATTATCTGCTCCACGCTTGCTTCATCAACGTTGGCACCC
ACGGCCGCATCCGAAGGCTTAGTCCCAGGCGGTTCAAACTTATGTTCAAAGTCCCAATCG
GTCATGTGTTCCATGAGCCAGTTGGATGCGGCTTCGATACCAGAGTTGTTGGTGTAGTAC
AAAGATTTCTTGCACGCTTCCACCGGGAACCCCATGTCGAGCAGTTGTGACAGTAATACT
TCATCGTATGTAGGAGCTGGGGTGTCAGGGGATGCCTCGGGCAGCTGCTTCTCGTCAGGC
TGCAACCCTCGTCCACGGAGGCTGCTTAGATCCACCTCCCAAGGCATGTCGACAGCCACG
TCAAGTTTTGCAGGGGTCCAATCTTCTTTGATAGTAAACTTTTTAAGTTGTATCAGGAGG
TAGTCAGGAAACGTCGCTAGTCGAGTTATTTTATGTGCGGTGACTTTCTTGTTTAAGGCA
CTACTGAAGAACTGCTCAATTGTCTCCTCCCTCATGAAACTCTCCAAGCAAGCTTTAAAC
GGAATGTGTGGCCTCACCACCAGGGCCGGGTCTAATCTCTGACCACTGGCTTCGGCCTGG
GCCCGTCTGGCCTCGTACTGCTGGACCTGCTCCACGTTGGTAGCAGCGGAGAGGGGCACG
GGCAGCGGCAGATGATGTTCGGCTCTCGTGGTGTACCTCACGCAGTTCGACTCCGAGCAC
TTGATGCGCTCCTCCACTGCGAACTTCAAGCAGTCCGCAGGGTTCGGCTTGTGGCGGCTG
TTTCGCTGTAGGAGCGTCAAGAGATGCAAGTAGAACTCGTGCGCGTCCTGCTGCCGCTTG
GTGGCGAACTCCGGGTGGTGCTTCCCGACGAGCTGCCGGTACATGTGCGGGCTCACCCCC
AGCTGGCCCCCCTCGGGGTCCGGGGTCGAGTACCGGCCCGACAGCAGACCCACGCCCAGC
TTTGCGGTTTGAACATTAAAATCGTTGACCGGATCTTCGGGGAAGGTGGCGAATATCTCC
GGAGCCCCCTCCACGTAGCGACGCACGAAGTCGGGCATTCGGAACATCACCTGTACGACG
CTGTTGATGTAACAAGAGTTTCCCAAGTTGTTGAGTCCAGTGAGAGCGGGCCCGTGCAGT
GGTCTTAGATCACTTCCAGATTCTTGCAAGGTATTCCATTCTCCCGAACGCTGGTTCAGC
TCGAGCTCTAATTCCACCATAGATTTATCTGTCTTCTGCAGCTGCTGTACATTAATCCCA
AAGTGTTTGAGGTGATCAGCGAGAAATGGGTCTTCCACCATATCATCTTCAGCGTACGAA
AAAACATCTCCTTTTCCTTCAGCGGTAATGGTTCCCAGCTTGACAGCGAGTGGATAGCCT
GTCTCTCTGTAGTGTTCTACAGCATGATCATTCCCTCCGGTGCCATCGAAGAAGCGACGT
CCGCAAAGTATGGACCCATCAGTCAGGTTCAACCAGAGGTTATTAGTCAGGTCACACTTC
TCACATTTCCATCCAGATGGAGGTATACGGATACCATTGTCCAGCTGCTTGAGGTTAACA
GAGTGTACAGAAACTTCACGTTTTTCACCATCCCAGGTGCCTTGTAATGCTGCCAATTCT
GCGATTTTGAATGGTGATTCTGCATCGATAACAGCTTGAACTGATTTCTTTACAGGTTCT
GGTAAATTAGGATCAGGCCATGGGAATGTGTGAAATCCTGGTAGCACCACCACACTGTAA
TGATCAGTGTATGTAAATTTAGGTTTTCCACATTCAGGATCAAAGCCTCCCTCAACTCCT
ATGGCGAGCCTGGTGATCTTCTTCTCGGGACCATCGCCTGTTTGCTCTGGTTCAGGGATT
GGTTGTTTCTCTCTTCTGATATGTAAGAAGACGGCGTTTCCGGTTTTCTGGAAATACTGT
TCAACGTAATTGCGCCCGAATCCCAAGAATGACACCAGGGACACATAGAGACCCGTCTCG
GATTCCGGGTTGTCAAAAGAATATACACATTCGTCTTTGTACACAAGCTGATGCGGTCCT
GGCAATTTAATTTTAGACAAATGAGACGTTAATAAGCTTAACGATGCCATATCGATAACG
GTGCTTTAAGGATTCTATCAATAGCTAGAGAAATTTAATTTTTTTGTTAAAACTTCTAAT
ATTTAACCTGACACGGCG
(2778 bp)

- SilkBase 1999-2023 -