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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9884_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_structural_maintenance_of_chromosomes_protein_1A_[Papilio_xuthus]
Ontology
GO:0000166 F nucleotide binding
GO:0000775 C chromosome, centromeric region
GO:0000776 C kinetochore
GO:0003682 F chromatin binding
GO:0005515 F protein binding
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005694 C chromosome
GO:0005737 C cytoplasm
GO:0006281 P DNA repair
GO:0006974 P cellular response to DNA damage stimulus
GO:0007049 P cell cycle
GO:0007062 P sister chromatid cohesion
GO:0007064 P mitotic sister chromatid cohesion
GO:0007067 P mitotic cell cycle
GO:0007093 P mitotic cell cycle checkpoint signaling
GO:0007126 P meiotic cell cycle
GO:0008280 C cohesin complex
GO:0009314 P response to radiation
GO:0019827 P stem cell population maintenance
GO:0030893 C meiotic cohesin complex
GO:0032876 P negative regulation of DNA endoreduplication
GO:0036033 F mediator complex binding
GO:0042770 P signal transduction in response to DNA damage
GO:0044822 F RNA binding
GO:0046982 F protein heterodimerization activity
GO:0051276 P chromosome organization
GO:0051301 P cell division
GO:0051321 P meiotic cell cycle
Transcript
Level		FPKM:7.80 TPM:8.54
ORF EntryO_BomoFB10827_complete:A_BomoFB_comp9884_c0_seq1
Sequence
(Nucleotide)
CCTATATTAATTAACGTCACAACTGAAATTAAAATCTTAAAGGAATGAGAATATAAAGAG
CTTGTTCCGTTTCTTGACCTAATCCGCGTAGTTCTCCAGGCTGAGGGTGATGACGTCACT
CACGAGGCAGTCCGCCGGCTCCGAGCAGATGCCGACCAGCGCATCGGCGCACCCATAGAA
CTCCTCCTTGAGCGAGATGACGATGGTCTGCAGACAGCCCTTCTTGGAGCGGATGTAGGA
GGCGACCTTGCCTATGTTGGTGTTGTCCAGGGCCGCGTCTATCTCGTCCAGCAGAAAGAA
CGGCGCCGGCTGGTAGCTGTGGATGGCGAACAGCAGCGCTAGCGCGGCCACCGTCTTCTC
CCCGCCGGAGAGGTTGGACATGGGCTGGAAGCGCTTCCCGGGCGCCACGCAGTTGTAGTT
GATGCCGTCCAGGTACGGCTCCTCGGGGTTCTCGGGACCCAGGAACGCCTGCGCCGACTG
GTTCATCGCCAGCGCCTTGTAGATGGCGTCGATCTCGTTGGCGACGTGCTCGAAGCAGTC
CATGAACTTGTCGTGGCGCTCCTTCTTCACCTTCTCGAAGGCGAGCTTGGCGCGGTGCGC
GCGCTTCCTCGCCGCCACGAAGGCCTCGTTGGTAGCGTTCACCTTCTCCCGCACCTCCGT
CAGCTTCTGCATGGCCCGCATGTTGGGCGCCTGGATCTTGTCGACGGTCGTCTGCAGGGA
GTTGATCGCCTTCTGCAGCTTGTCCGCGCGGCGCCGGACCTCGTCGGCCTCCTCCAGGTC
GCGCAGGCTGTCCGACAGCATGCTGTAGTCCACACGAATCCTGGATTCCTTCCTGTACTG
CTGCGTGGTGGACATGGAGGAGGGGTCGGACTCCGTGTCGGCCGTGTCGTCTAGGCTACC
CTCCAATAAGGGTATTATTATGTCATCGATCTTGCACTGCCGCAGTATGTTGTGTCGCTC
GCTGCGCTTGCTCTCGATGCGCGCCTCGATGCTGGCCATCTGCTTCTGGACGCTCTGGAT
GTCCTTCTGGATGCTGGACACCTCTTTCCGCGCCTTGTTGACGTCCTCCTCCGCCTTCTC
GAGGTGCGTGCGCGCGGCGGCCCGGTCCGCCTTGAGCGTGTCGGCGCGGCGCAGCTCGTG
GTCGATGTCGGCGCGCTGCTTGGCCTCCGCCTGGCGCCCGCCCTCCAGCTCGTCCTCGGC
GTCCTGCACCGCGCGCTCCCACCGCGTCACGTTCTTCTGCGTGTCCCGGGATCGCTCGAA
CTCCAGGTTGGAGGCGACCCTGTCGATTTGCGCTTCAAACTCCATCCGCCGCTTGGCGCG
CTCCTGCTGGGCGCGCAGCTCGCGCTCCTCGTACTGTCGGATGTTGGCGACGCCGATGTC
CCGACAGAACGCCTTGAACACGACGTCCTCCACGTTGTTCATGTTCTCCTTCACCTCCTG
GATCTTGGCGTCGCGCAGCCGGATGGTGCGCTCGATCTCCTCGATCTGAGGCCCAAAAGT
TTCCATCTTTCTCTCCAGCTCAACGATCTCAGCATCCAACGTCTTAATTTGTTTTAAGGT
GGTGTCCCTGTCGGTGACGGCGTACTTGAGTCTGGACTCGAGCCCCCGGATCTGCGAGTC
TACGGTGGTCAGCTCCGACTCCTTGCGGGACTTCTTCATCGACTCCCGGAGCTCTTCTGT
TAGCTTCTCCTTTTTAGCTTTAAGCTGTGAAAGATGCTTCTCGTCCCATCGTTTAGCTTT
CCTCGCCAGATCCAACGAGCCCCCCGATATGATGCCAGACTTCTGGTAGAACGTGCCGTC
CAGCGCCAGCGCATCGTATCTGCTGTTCTTGTTCCGGTCGAGGTCGTAGGCGACGCGCGA
CGCGTCCTCGGGGGTCTCGCACACGAGCGCGTTGTTGGTGACGAAGAGCACGGCGCGGTG
GATGGCGGCCGGCTCGAAGCGGAGCACGTCGAACAGCAGCTTCACGTTCTTGGGCTCCTT
TATGTCTCTCAGTCTCTCCCGCAGCGGTTTGGCCTGTATGTAGTCCAGGGGGAGGAAAGT
CTCCGGTTCCAGCATTCTTTCTTTCAGCACCTGGATACACCTCCGGGCTGTCTTCTCGGT
GTCCACCACGATAGCTTCCATGTACTTCCCGAGGACCTTGGTGATGGCCACGTTGTACCT
TTTGTGGGTCGGCTGGCACATGTTGATCATTCTGTCGTAAACCCCGGGGATGTCTCGCTT
GAAGCTCTCGACGATCTCCTGCTTCTTCCTGCGGCGCGCCTCCTCGTGCTTGTCCACGCG
CGCGTCGCCCAGCTGCGCCGCCACGTCCTCCAGCTGCGTCTGCAGGCTGGCGGCCCGCCC
GCGGCACGAACCCACGTCCGCCTGTAATTCAGCTCGTAGTCTCCTCTGTTCCTCAAGGGC
CTGTTCCGAACTCTTGATGTGTTCATTTAGTTTGTCCACTCTCTTCACAGCTTCGTTTCT
CTCGTGCCCCTTCTGCCGATGCTTGTTTTCCAGCTCTCCCTTCTTCCTCAGCTCATTGTC
CAGACGATCCTGGTCTGCCTTCTGTTCCCTATTCACGGAATCCAGTTCCTGGAGGTAGCG
AGCTGCCTGACGGGATGCTTCCATCTTCAGCTCTTCATATTCACGGATCTGGGCCTCCTC
CAAATGTACATCAGCCTTCCCACTGTGACCGGTACCACTAGCTGTTTCCCATGTTGCCTT
TTGCTGCTCCAAGGTTCTAAGCTCCTCCTCCAAAGTCCTGATGTCATCCTGATGGGCCTC
ATGAGCTTTCCGCGCTTGTTCTAATGTCTTTTGAGCACTTTCAAGCTTCTTCTGGGTGTG
AGTGACTCGTTCTTTTGCTTTTATGAAAGTTGGTCGTTTTTTTGAAATCTCTGCTTCCAC
TTCCCTAATGTCCTGTTCAATCTTTGCGAGCTCTCTCTGTACGGTTCCGGCTTCTTTTTT
CTTTTCCTTTAATGCTTCTTCAGCCTTCTGTCTTTTCTTCTCAATTTTTGCTAATTCTTG
TTGTTTGTGTTGCAAATCTTCTTCATAAGCCTGGATCTCTCTCTCGTTGTGATACAGATG
GAAAAGTTGAAGTTCCACTTTTTGCTCTTGCAATTCTTGCTTAAGTCTTGTGTATTTCTC
CGCTTCTTCCTTCTCAAACTTTGCTTCTTTCCTCTCAGCTGCCACTCCCTTCTTTTTCTG
ATAGGAGAATTGAGCCTCCTCATCAGCTCGGTTTACTTCAGCACGGCAAGCTTCATACTG
TTCCTTTAACACTCCAGACCCGCTGATCTCCTCAAACAGAGTAGTCCTTTCTTTAGGATT
CTTCATGGCAATGCTCTCGACGGCACCCTGGAAGACTAGGAAGTTCTTGGCTTTCACATT
GATGCCCAATTTCTCTAGTTCACCAAGATAGTTACTTACTGATACAGACTGGCCATCAAT
TTTATGTTCAGACGATTGTCCAATCACTGATCTCTGGAAATGTTTCTCAGTCATGTCTTC
CAGAACAAACGTTGCCGTAACAGATGCACTTCGAGAAACAGGTTTGTTGATTGAAGCACC
ATGGATCAAGTCACTCAACCTCTTCACACGCAACAATGATGTCTTCTCACCCATCACAAA
GCTCACAGCGTCCATGAAGTTGGACTTTCCTGATCCATTAGGGCCAACAACAGCGGTAAA
AGACTTCAGAGGACCTATGCGGTGATGTCCTCTATAGGTCTTGAAATTTTCCATATCGAT
ATATTTAAGAAACGCAGGCATCTTGATTAAGACTAACTCCCATGCAATACTGTAATGCTT
TTAATTCACAACACAAATTAACAAGCGCCAAACATAATCACGAATTGTTTGTACAAATGT
CAAAG
(3845 bp)

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