SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9863_c0_seq1
Scaffold_idBomo_Chr21
NCBI non-redundant
(nr)		hypothetical_protein_KGM_04775_[Danaus_plexippus]
Ontology
GO:0000339 F RNA cap binding
GO:0003723 F RNA binding
GO:0005634 C nucleus
GO:0005846 C nuclear cap binding complex
GO:0006370 P 7-methylguanosine mRNA capping
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0016070 P RNA metabolic process
GO:0031047 P gene silencing by RNA
GO:0045292 P mRNA cis splicing, via spliceosome
GO:0051028 P mRNA transport
Transcript
Level		FPKM:7.35 TPM:8.05
ORF EntryO_BomoFB10766_complete:A_BomoFB_comp9863_c0_seq1
Sequence
(Nucleotide)
GGGAAATTCACACGGTCATCTGACAGCACTGCTTTGTCGCAAGATTTCGGAGTTGAAGAC
ATTGAAAATTTATTCAAAGCTTGTTGAGTTTGCTATCGTTTTTTCTGTTCTAAACGTAAA
ATACGATTTCGTAAACAAAAGCATAAAGAGAAAAGTCAAAGATTTGTGATACGCACAGTG
ATTTTATTATGAACCGTCGTAGAGGACATGATGATGAAGAAGGATATGAACGCCTCCATC
GGAAAAGGCGTCGTGTATCTGAAAACCAAGAAATCGAGGATCGCTTAGAGTCCTTAATTT
TAAGAGTTGGCGAAAAAAGTAGTTCCAGTTTGGAGAGTAACCTAGAAGGATTAGCAAGTG
TACTGGAAGCCGATTTGAGTACCTTTAGAGTTAAAATACTACGGATACTAACGGATTGTG
CTATCCGCATGCCCGAGAAATGTACAATCTATGCAACTCTTGTTGGTTTGTTGAATGCAA
AGAATTATAACTTTGGTGGAGAATTTGTTGATTACATAGTAAAAACCTTTAAAGAAAATC
TTAAAGTCGGGAAATGGAATGCTGCTAGGTATTGTCTAAGGTTCATTGCGGACTTGGTGA
ACTGTCACGTATTGGCTGCTTCATCATTGCTGACTTTATTAGAGACATTAGTAGATTCTG
CTAATGAAGATGGAGTACCTCACGTCAGAAGGGATTGGTTTGTATTTGCGGTGCTGTCAG
CATTACCTTGGGTTGGTCGGGAGTTGTATGAAAAGAAGGAATCTCAATTAGATCACTTAC
TTGTGACTATAGAGGTTTTCTTGAATAAACGGAGTAAGAAACATTGGCCAGCCTTAAAGG
TGTGGTCGGCTGATTCACCTCATTTACAAGAAGAATATTTGGATTGCCTCTGGTCTCAGA
TAAAGAAGTTGAAACAAGACAATTGGTCAGAGAAACATATTCCAAGGCCATATCTTGCCT
TTGACTCTATTCTTTGTGAAGCTTTACAACACACACTTCCTGCCATTCAGCCACCACCCC
ATAATGACACTGATACTTATCCAATGCCTCGGGTTATATTCCGTATGTTTGACTACACAG
ACTGTCCAGACGGACCAGTTTTGCCTGGAGTGCACTCTATAGAGAGATTCTTGATAGAAG
AACATTTGCACAATATTATTGAGACATATCATTTAGAACGTAAAGAATGTGCTGCTCAAC
TCCTCTGCTTTCCTTACAAAGCCAAAATTCCTCTGGAATATTGCATAGTTGAGGTGATAT
TTGCTGAATTATTTAATTTGCCAAAACCAAGGTATTTGGAGATATGTTATGGTTCAATAT
TAATTGAACTTTGCAAGCTTCAGCCATCAACAATGCCACAGGTTCTAGCTCAAGCTACTG
AAATTTTGTTCATGAGGATTGACACCATGAATGTTGCTTGCTTTGACAGGTTTGCGAACT
GGTTTGCCTACCATTTGAGCAACTTCCAGTACAGATGGTCATGGGAAGATTGGGAGGCGT
GTCTCCAATTAGATCCTGAACATCCAAAACCCAGGTTTATCAGAGAGGTCCTCGGAAAAT
GTCTAAGGCTATCTTACCACCAAAGAATCAAAGACATGGTCCCAGAGTCGTTTGCATCAT
TTGTGCCACCCAAGCCTGAACCAATCTACAAGTATTCCATGGAAGGTGCAGCTGCTCTAC
CCGGCACCGAAGCCGCCCATCAGCTCGTTGTATTCGTGCGTAACAAGTGCACACCCGAAG
AAGCCTTGAACGTTCTCCGCGACCTACCGAACCCCCTCAAGGAGGGCGAACAAACGGCCA
ACCAGCCGACCGCGTACAACCCCCTGAAAATCGACGTCTTCGTGCAGACCCTGCTGAATC
TCGGCAGCAAGAGCATTTCGCACAGTTTCGCTGCGATCTCGAAGTTTCATTACGTTTTTA
AGATCTTAGCCGAGTCTGAGGAGGCGCAGATATGCATCCTCCGCAACGTGTGGGAGCTGT
GGCAGCGACACCCGCAGATGGTCTGCGTGCTCATCGACAAGATGCTCAAGACTCAGATCG
TCGAGTGCAGCGCCGTCGCCACGTGGCTCTTCTCGAAGGAGATGGCGCCCTACTTCACGC
ACGGCTGCCTCTGGGAGATGCTGCATCTGACCATCGACAAAATGAACAAGCACGTGTCGA
AGCTCAGTGCAGAACTCCAGGAAGCCCGCGAAGCATTAGCGAGAGCGGACTCGAGCAGTT
CGGATTCTGAAGATGAGAACAGTAAGAAGAAGAAAGACCAGGACAAGCCTACTGAAGAGG
CGGTCGAGCGTATGGAGGAGCGCCTGGAAGCTGCACATATGGACCAGAAGCGGCTCTTCC
TGATCGTGTTCCAGCGGTTCATCATGATCCTCTCGGAGCATCTCGTCCGCTGTGATACAG
ACGCACGGGACCCTCACACGCACTGGTACCGCGCCACGCTGCACCGCCTCACGCAGGTCT
TCCTCATCCACCACGAGCAAGTCCAGAAGTACAGCAGCACGCTGGAGACGCTGCTGTTCA
CGCAGGACCTGGACCCTCACATACTGGACGTGTTCCACCAGTTCGTGGCGCTGACCGCGT
GAGCGTCGCCGCGAGACGAACAACACACAACGTTAAAGACTGCTCCATAGAGACGACATT
CGCTGGTTGATTATTAAGTTAAGGGATTCTCGTAATATAATAATAATAATATAATTATTT
GTGCAGGACTTTTATATATCATCATGATACATTATAATTACATATTTAGGTGGGATGTCA
TCTGTCAAATCTGTTAGCTTTTTGTTCGCATAATGATTAAAGTCAATTTGAATATATTAT
TTTCTTATGATCTTAATTTGTTAATGTTGTCGTGGAAGTGTTGTCATGTTTTTTTTTATT
GCCTTTTTAGGCAGACGAGCATACTGCCTACCTGATGGTGAGTGGTTACTGTCACCCATG
GACTTCAGCAATGC
(2954 bp)

- SilkBase 1999-2023 -