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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9831_c0_seq4
Scaffold_idBomo_Chr28
NCBI non-redundant
(nr)		PREDICTED:_ubiquitin_carboxyl-terminal_hydrolase_1_[Papilio_xuthus]
Ontology
GO:0001501 P skeletal system development
GO:0004843 F thiol-dependent deubiquitinase
GO:0005634 C nucleus
GO:0006281 P DNA repair
GO:0006282 P regulation of DNA repair
GO:0006508 P proteolysis
GO:0006511 P ubiquitin-dependent protein catabolic process
GO:0006974 P cellular response to DNA damage stimulus
GO:0008233 F peptidase activity
GO:0008234 F cysteine-type peptidase activity
GO:0009411 P response to UV
GO:0016579 P protein deubiquitination
GO:0016787 F hydrolase activity
GO:0035520 P monoubiquitinated protein deubiquitination
GO:0036459 F thiol-dependent deubiquitinase
Transcript
Level		FPKM:2.04 TPM:2.24
ORF EntryO_BomoFB10647_complete:A_BomoFB_comp9831_c0_seq4
Sequence
(Nucleotide)
AAAAAAGAGAAAAAAAAAAAGAAAAAAACAATATAAAAAAAAAAAAATGTTTTTGATAAA
TACTGTGAATGTTTATGCGAGGTCTTTAGACACTTTCTGCCTTATTCCAAAGGATTCCAT
AATAGTAATTTAGTTTTATTTCTTCAGTGAATTCGTTTCGCGATTTGGAGCCTCTAGAAC
GCATGAGGGAAAAAATAAGATTGCATTTTTGATTGAAACAAATACTTACAAAAATATGGA
GGTCTTACCAAAAATGTATTCAAAATGTTCTGAAATTATTGTCGAATCAAATCCACGTTA
GAGTGCTCCTTCCTCGCAACCACAGTGGACATTCACCGTGAACACTGGGACACAGCATGG
CTGCAACTAGCCCACTTCACTTTTCACATAAAACAGGAGATAGGGAGTTGCGGCAGATCT
CATTTTCGGTTCAGCCGACAAGAGATCTTCGAATTCCTCATTCGATATGGGTTTAACAAG
TTCATCGTCACATGCGAGCCAGCATGGTTCTGTTCTAGGTCTTGGGACGCAACATTCCTT
AGCTGCACAGCCAGTGGGCGGGTGGCGAGGTCGGTTGAAGAGCGTCCTCATGAAAGAAGA
CGAGGAGGTTGTGGTGGCATCACCGCTACCTTCACGAGAGCACTTGAAGTCACAAGAACT
ATCGCGCGCATAAGCAACGTAATGCCCGCCTGTTAGGGTCTGACCGAGGTGCATTATCAC
TGCCCATAGGATGTATCTGTGCTGTGGTGCACGCTCGGGCGGTCTGGAAGCGCAAGGCTC
ACAGAAACAAGGCATAAGTAGAGGCGTCGGTGCATGTCTTGTTATCTTTTCCATTCCCCC
GCTGAATCGTTTCAACTGTAGTACCAGCAACCGCGGCAGTCTCGAATAAGTGACGCTGCG
ACGAGCTTCGTTGTACCGTAGACAACGTTCGCACCAATACTTGTTCTGATCACGCAGGTA
TTCTGTAGACAGGCAGGCCGCCCGGAACGGTTCCGCTCCTGGTTCTTCTTCGCCAACCGG
AACGCACAACTCACAAACAGCCTGCGCCTTCTGAGTGACCGCTTCACATTCTAAGCACAT
GGTCCGCACTACCATCGTACCTTCAAAATCTTCAGCCACAAAGTCCCATCCTGGTCTCGA
CCGCTCATCTTTCTCAGCATCCACAGGCGACGGTTCCCGTTCTTCAGTCGGAGAATTCCT
TTTGTCGTTGATTGCCTTGATTTCTTTGCGTTTCTTCCACGACTTACGAAGATTTCCTAA
TGTTGGTTTCCCGTTGTCTCCATCTAAGCTTGGCTGGCGGCCTATGCCGTTACTGTCTCC
GTTTTCGTGCATCTGTAGTCGAGCAGCGCGCGCACTCAGCGCTCTGCAGGTCTCCCGTAT
GTTGTCCAAAATACAAACTAATAATTCATGAGCGTCCTGCTGTCGATTACCTTCAAAAGT
AGAATTAACATCTCTAAGAGCAGCCAAGAAGGCATCCGCTGCATATGGCTCAGGGGTAGC
CTCAGAATTGGTGCTGTTCAGACATTTGTTCTCAGCTGCACGAAGATTAAAGTAGGTCTC
GTGAAGTTTTTCTGTCGCTATCTGTATTTTACTTTTTCCAGAACTATTATCTGACTGGCC
TAATGACAACAAGTCCTTGCTACTCCATGATCTAGTCCCAGATGATACTAAGCCCGCAGC
ACTCCGACCCAATGAAGAACTTTTGAGCCTGATGCTGCCCAACTTTTGCTCAACACTGGC
CAGATCTGACACTAAATGGTGAAGGTTGTGCAGGAACCGAGGTGCATACCTCAAAGTATA
AAGCACACTATTGAGAAAACAAGTGTTCCCCAAATTGGACAGTGAAGACACAGGCATCTT
CTTCTGCACCCCTCCATATTGAGTGTCAGGAGGGTGGTGGCCATTCAACATGACCGAGCT
TGATTCTCCCTCCTCCAGAATTGCTAGCTCTGGATTCAATGTTCTGTCTGAATGCTTTAG
GGTTGCTGTGTCCCTATTTACTGTGGGACCTGCAGATTTCGATGATTCACTTAGAGGCTT
CAATTTTTTTGCTGCACTCAACGTGTTGGAATATATGCTTTTGAGCGGCCTCTTTAATGG
CTTATTCTCCTTGTTATTACCAGAACTGCATGGATCTGTATTCTCTTTAATATTCTCGTT
ATTTTTCTTGTTTTCGTTGCTCAAATGTGGCGCATTATTTCTGTTCAGTGATAGTGAGAA
TCTTGGTTTATCGACACCTTTTTTCGTTTCGGTTACAAAATTAAATGGCATCTTCAGCGC
ACATTATATTGTAAGGCAACGTTATCTCGTATAATAAGTACTCTGTTATTTCTTAAAATT
TGTTAAAATAAACTGCGAAGATCCGATAGGGATCCGGTAGGGATCGGTCGGCCATATTTG
(2400 bp)

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