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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9765_c0_seq2
Scaffold_idBomo_Chr3
NCBI non-redundant
(nr)		PREDICTED:_long-chain-fatty-acid--CoA_ligase_5_isoform_X3_[Bombyx_mori]
Ontology
GO:0000166 F nucleotide binding
GO:0001676 P long-chain fatty acid metabolic process
GO:0003824 F catalytic activity
GO:0004467 F long-chain fatty acid-CoA ligase activity
GO:0005524 F ATP binding
GO:0005634 C nucleus
GO:0005730 C nucleolus
GO:0005739 C mitochondrion
GO:0005741 C mitochondrial outer membrane
GO:0005743 C mitochondrial inner membrane
GO:0005783 C endoplasmic reticulum
GO:0005789 C endoplasmic reticulum membrane
GO:0006629 P lipid metabolic process
GO:0006631 P fatty acid metabolic process
GO:0008152 P metabolic process
GO:0016020 C membrane
GO:0016021 C integral component of membrane
GO:0016874 F ligase activity
GO:2001236 P regulation of extrinsic apoptotic signaling pathway
Transcript
Level		FPKM:6.14 TPM:6.72
ORF EntryO_BomoFB10342_complete:A_BomoFB_comp9765_c0_seq2
Sequence
(Nucleotide)
CGGCTTTGATAATAGTCGACTCACGTTTAAACATACAACGAAATAAGATAAACAACCCCA
CATTGCCCAAGCTTCGTTTTTTTTTTAAATCAAATTTCCCAACTTATTCACTCATCATTC
ATTACAAATTACATTGCGTTATCGAATTTACTTCTTCTTCTATCGAATTCAAAGTATGTA
CGAGTATTCATTATCAATTACAATATTACAGCCATCCACTAAAGTTCGTCTCCGTCAAAC
AGCATGCCTCTACAGTTTAATTAGTGCATTGTGCTCGCTACCGTTATTCAAGTTGCTTGT
ACATGTCCTCTATTTGCGGTTTGAAATAACTTCGTATTTCTGGTCTCTTCGCCTTCATCG
TTGGCGTCAGTAGGCCGTTCTGTACCGAAAACGGATCCGGATGCAAGTATATATCTTTTA
CCTGTTCAAAAGTTTTCAGGCCAGCGTTCCTGCCCCACTGAAGCATGTCCTCCATGATGA
CCTTCTTGACTCGTTCATCCTCGCACAGAGATGAGAAGGTTCCTTTGATACCGTATTCTA
AAGCCCAGCATTTAACGACATCCACGTCCGGTACAACTATAGCGACCACGCAGGACTTCA
ATGATTCACCGTGAACAAAGACTTGCTCAACGTACTGACTTCTAATGTAAATGTTTTCAA
TTTTCTCAGGAACTATATATTCGCCTTGTGACAATTTGAAAATGTGTTTTCTTCTGTCGA
TTATTTTCAGGGTACCGTTAGGTAACCACTTGCCGACATCGCCGGTGTGATGCCATCCGT
CTTGGTCGATGACCTCTCTGGTTTTCTCCGCGTCCTTGAAGTATCCTTTGAAGACGTTAG
CTCCCTGCACGCAAACCTCACCCTGGCCCTGCGCCGCATAGTACTCCATTTCGGGCACGT
CCACTAGCTTCACTTTACAACAAGCGACGGGAGGGCCGACGTGTTCAGGAACATGATCTC
CCTGAACTGTTAGCGTCACCGGCGCAGTGCACTCTGTCTGACCGTAGCCTTCCACGATCA
AACAACCGAGGGCGCATCTCGCGAAAGTCAGTACGTTTCCTGCTAAAGGCGCTGATCCGA
CGACCATTATCCGAAGTCGTCCTCCCATACCTTCTCGAACCTTGCGGAAAACTAACTTGT
CCCATATCGAGTCAGCACGAACTATTCCTCTCTTCAATTCCGATTCTTTTGCGGATAGCG
CCATGTTGAAAAGTAATTTCTTGATTTTCGAGTTGGCGATCTCAGTCTGGGCTTTGTCGT
ACAGTCTGTTCAGGAGACGTGGAACAGCCGGCATCATGGTCGGCTTAAGAGCGGTGAGGT
CATCGCCCAGCCTCCTTATATCGCCACTGTAGAAACCAACGGCTCCTCCCACCATGTAGA
GAGCATTCTCGCAGCATCGCTCCAGCATGTGAGCTAAAGGCAGGAAGGAGATCATGATGT
CGTTCTTGGTGGGTCGATGCTCGCCGAGTTGCATCGTAACGCTGCACATCGAAGCTACAA
CGTTCTCGTGAGTCAGCATAACGCCTTTAGGCATCCCAGTCGTTCCGGACGTATAACATA
TTGTACAAAGGTTTTCCGGTTTCGGTGGGACAAAAGGATGGTCCTTTTGAGCTCCCTGTA
TTTCGACGTCAGAGAACTTCAAAATCTCAACACCACGGCTCTTGGCGCGTTGAAATGTAG
ACGGCGATACTTCCTTAATTGTAATCAGTTTTCTGAGGCATCGAGGCGACTGATCCAGTA
GGAGATTGGCTTTTTTGTCGTCTTCACAAATTACTACAGCCATTTCAGTTTGGTTAACAA
TGAAGGCACAAGCGTTCGCTCCTAGCGTATCATACAACGGAACTATAACCATCGAATAAC
AATACGCCGCCTGTTCGGTCATAATCCATTCAGGACAATTCTGCGAATAAATACCGACAA
ATGTAGTCTGACCGGGAATGAGACCTTGACAGAGCAGACCGGAACCAAAATTCTTTGCGC
GCAGTAGAGTCTCATTATATGTCTGCCAAACGTAAGGCTTGTTCGGACCCTCGCGCCAAC
CCAAACAGTTGCCATTGTTCGACTCTTTTACGCCTCGTCGGAAAGTGTCGTAAAGTGTGC
GTGTATCCTCGTGAAGATATCGTAGGAAACGTCCGTTCTTCGCGTCTTTGTAGAATTTCG
AAACACGAACCATCTCAGGTCCTTTGAGGGCCTCGGATTGGTCATTAAGATTAATCGGAG
GTCGAATCGGAGGAACTCCGACACAGCAATCACAGCAGGCCATTGTTTTAAAGTAACGGT
CACACAAAACACAAAATGCACCGTTCCTCTTCAAACTTCAAGCTTTATCACATTGCGCAA
TCATAACTGTCCTTTATGATGATACTTTTCAAGATTCACATTCACTCAATATAACGCAGA
CGTTCTTAGATTTGAAACAAGATTTTGTTGAAGCTAAGGCTAAGCGGTTAGCCTCTTCAC
TTTCGCTGCTATCTATTGGTGTCTGGCAAGAGAGTTTCGGCCAGGGCTGCCG
(2512 bp)

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