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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9763_c0_seq6
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_protein_nhl-1_isoform_X2_[Papilio_xuthus]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
Transcript
Level		FPKM:16.08 TPM:17.62
ORF EntryO_BomoFB10327_complete:A_BomoFB_comp9763_c0_seq6
Sequence
(Nucleotide)
GCGGCGCGTTCGCGAGACCACAACGCTGTGATACAAATACTCTAGTCATCATCAACGAAA
ATGACAAATACATAAGCGAGGTTAAGCAAAAATGGAGCAGTTTGAATCGCTGCTGACTTG
CTGCGTGTGTTTGGACCGGTACAGGAACCCTAAGTTGCTGCCATGCCAGCACAGCTTCTG
TATGGAGCCCTGCATGGACGGCCTAGTCGACTACGTTAGACGACAGGTCAAATGTCCAGA
ATGCCGTGCAGAGCATCGAATTCCCTATCAGGGAGTTCAAGGGTTCCCCACAAATGTAAC
GCTCCAAAGATTTTTGGAGCTCCACGCTCAAATTGCTGGTGAACTTCCAGACCCTACTGC
TGGGCAAATTATGGAAAGGTGCAATGTTTGCTCAGAAAAAGCGTACTGCGCTTTATGTGC
ACATTGTGACAAAAAAGTATGTGATGACTGCAAATCTGCTCACATGGAGGTATTACGTCG
CGAAATTGCAAGAATAAATAATCAAGTCCGTCGTGGCATGAACAGACTACAAGATATTTT
GGGTGTTGTCGAACGCAACACGACGAATCTCCAAACAAACTGCGCAGCAGTTGCGGGTGA
AGTCGACGAAATTCACAAAAGGCTCGCCAAAGCTCTGAAAGATAGAACCGACTTCTTGCG
CACTGAAGTAGATCGGTATCTAGCAACTGAGCTTAGAAATCTAACTCATCTCAAAGATAA
TTTAGAATTAGAATTAAGTAACATACAAAGTAATTGTGATCTCGCCGAAAAGCATATGAA
CGATGACACTGAATGGGAAGACACAGAACTTATGGACACGAAGGAAATTTTCCTAAAAAC
TGTGGAATTCTTAAGGAACTTCGATTACGAAGCTGGCGATTACAATCGTAGAGTGCGATT
CATTATGACGCACGACCCCAACCAACTTGTAATGCATGTCGCTAGCTATGGAGAATTGAA
TATAACTCAACCCAACGCTTATTCTGGGGGTCTACAGCCAAGTCAAGGTCTAACTAGATC
GAAGAGTGACCATCGCTTGGCGACGCAATTTAGACAGCAGGAAGAATCCAAGAATTACTA
CGAAAACGATGAACCGATCCTTGGCGGACGTAAGTTTGGAGAACGTAGACCGCCACCGCC
TGAAAGACATACCCGAGACTACAATGTCACGGATGACTATAGCGGATATGAGTCTGAGCA
CCGACCCCGTAGGTTCCGCTCACGTTTTGTTAGAAGTCACCAACAAGACAACGATTCTGA
TACAGAACAAAGTATTCGTTCAGCTAAAACAGAAAAACAAGAGAAGGAAAAAGAGAAAGT
TGTAGATACAGAAGATGCTACCAGAGGACCTCTAAGCGGCATTTTCAGGCTAAGCGATTG
TCCACGAGTAATGCAACGAATTATGGATGCAGAAAGTGGAAAGAAGAAAGAGAAGAAAGA
ACCTCCGCCACCACCTAAGCCCGTAGTTCAACCGACACCGCAACCTCGCCGTCCTCCACC
TGCTCAAAGGCAACAAAGTGAGGATGATGAAATAACACGCCTTAAAAGACAAAACAAAGG
CGCAGCTTCATCACAAGAACCAGATCGTCCAGCCCCAAGACCTGTTGAAGAAGAAAGAAC
TTCGATAGCACGCAAACCACCTACACCAGCTCGGGAGGCGTCAAGCGATGGTGAATCTGA
TGAATCAGTCGGATCTTTACAACGTACTCAACAACGTAAAGCTCCACCTCCAGTACAAAA
ACCCGCAGCGACCGGGAGAAGACCATCCGCGGATGCTCCTACACCACATAGACCGGCTGC
AAGAGCACCTAGCACAGAATCAAGCGCATCTACAGAAAGTTCTGGCTCGGCGGTTAAGCA
TACAGGAAACGAGAGAACTGCACCGGTTACAACCAACGGTACAGCTGGAGGTGCGCAACG
GGTACAGAGCCGCTTTGTTGGCTCGCAGAGACCTACGCCCGCTCCGGCTCCCGCCGAGCC
GGCGCACGATGAAGATTCAGATACGAGTTCCGAAGAGGAAACAGATTCGTCAGAGGAGAG
TGAAGAGGAGCCTGCACCTCAAAGAAAGCCCGAGAGCCAGGCGATGGCTCGTAGTGACAT
CGGCCCTTTACTTGCGCGTAGTTCAAATGCTCGCAGTGATGCTCATGATAACAAATCCAA
AGATCCTCCACCTTCACAAACTCGGTACCGATCAAGGCAACCATCTCAAACTGAAGAGGA
GCCCGCACCACGATACGGTGCCGGTTCTTCTTACAACAATCGTTATGGCAGCAAGCCAAG
AGAAGAAGAAACGACGTCATCCATAGATGATGATTCTAAATATCCAACGGCCAGATCGAG
ATATCTCGCCTTAAAAGAACGGCGAAACCGTCTCGCAAGAAGTAAAAGTAGTCACACCGG
ATTCGGTGCGGGAGACGACGATGATCAGGACGATCCTGTGTCTCCAACCACGGCATCGCC
ATCGGCGTATTTGGCGGCTCGGTACGGCTCCGGGACCGGAGGGTCGGAGTTGTCTCGTAG
CAGGTCATCTCACGCGCTGAAGTCTAGAGAAAGCTCGCCAGAACGACCACCGACTGGCGA
GAAAGATGGAGCAGCACTCAGCTCGTGGGCACGGTACTTGAAAAACAAGTACGGCTCCCG
CGGTAAAGAACGAGACACGAGTGGCACGTCCTCGAGCGCGTCGCGTCGTCTGTCTCTCGG
GCTGCCTTTGCGCTCGGCAAACGAGCTTGCCAGTTCTGATGACGATTCAAAAAACGCGGC
AGGCTCCCCCATCTCCCCTACGGCGGCTACAGCAGCGGTAGCAGGTTTCGCAGCAGCAGG
TTCCTCCCCTAGGAGCCAGTATCTGCAGAAACGCCGATTACAGTTCAGCGTGGGGAGTCG
GGGGAGCGAACCTGGTTGTTTCACATGGCCTCGTGGTATCGCTGTAGGTCCAGATAATAC
TATGGTCGTGGCCGATTCATCAAATCACAGAGTGCAGGTGTTCGACTCTAATGGAATATT
CATCAAGGAGTTCGGTCAGTATGGAAGCGGCGAAGGCGAGTTTGACTGCTTAGCAGGAGT
TGCTGTTAACCGCATCGGGCAGTACATCATAGCTGATAGATACAACCATCGCATACAGGT
TTTTGACCCTCAAGGTCGCTTCCTAAGAGCCTTCGGGAGCCAAGGTACCGGAGACGGCAA
GTTCAACTACCCATGGGGCATCACCACTGACGCCCTCGGATTCATATACGTGTGTGACAA
GGAAAACCATAGAGTGCAGGTGTTCCAATCCGACGGCACCTTCGTGGGTAAATTTGGTTC
CTTCGGGGCCAAGCTTGGTCAACTAGAACATCCTCATTACATTGCGGTTTCCAGCACCAA
CCGAGTTCTGGTCTCAGACTCGAACAACCACAGGATCCAGGTCTTCGATGTAAACGGTAG
AGTTCTGTCTTCGTTCGGCGAAGAAGGGTCCGAAGATGGCCAGTTTAAGTTCCCGAGAGG
TGTAGCAGTGGACGACCAAGGCTACATCGTAGTGGCTGATTCCGGTAACAACAGGATCCA
GATCTTCCATCCGGATGGAACCTTCCTCAGGGCGTTTGGCTCTTGGGGCTCCGGAGACGG
GGAATTTAAGGGATTAGAGGGAATCGCTGTCATGACCGGTGGAAATATCATCGTATGTGA
TCGGGAGAATCATAGGGTGCAAGTGTTTTAAGTTTCACGAAAACAACAATATTTCATTAT
TACGTAAACAATAAAATGAACAATACTTATAATATATAATAACAATACAATACTGTTTTT
ATCGGTGGGAACTTTGTAACATTAGCATTATTAACATTTTACAACGAGGCATTTGTAACA
TAAATTTAAATAGAAAAAAAAACGAATGGAGTTCATACATATTGTAAATTCACATTTTTT
ATATAAACCAAAGCTTGTGTCTAAATAATTTTCATTGTACACATGAATACGCATAGTCTG
TTAACGAAATTCTTTCTTAAAAAGATTTCTTTTTGTTTTTTTTTAGTTTTTCTATTAATA
ACACTCAGTGTATTTTTAATGTTTTGTATATGAATAAATAAATCATACATTTACAACGAC
CTAGTCATTGATTAAATATTACTTTTT
(4107 bp)

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