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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9763_c0_seq5
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_protein_nhl-1_isoform_X2_[Papilio_xuthus]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
Transcript
Level		FPKM:30.55 TPM:33.47
ORF EntryO_BomoFB10324_complete:A_BomoFB_comp9763_c0_seq5
Sequence
(Nucleotide)
GTCAGTCAGTACCGCATTAGTTTCGTTGTGCTAGGCGAGCGCACAAACGTGCGCCGCCAC
ATAGTGAGAAGAATAGGTGCAGAAGTGTATTTAAAGAAGATGCCGTCTTTTTTCACATAG
TGGGATTAGAATCCAACCGATAGTAGAAAGTACTCGAAGGAGAACCGCGTGCGGGCCCAC
CAAATAGGTCGGGCCCGCCACTGCTGAAAGTACTACAAAGCAATACATAAGCGAGGTTAA
GCAAAAATGGAGCAGTTTGAATCGCTGCTGACTTGCTGCGTGTGTTTGGACCGGTACAGG
AACCCTAAGTTGCTGCCATGCCAGCACAGCTTCTGTATGGAGCCCTGCATGGACGGCCTA
GTCGACTACGTTAGACGACAGGTCAAATGTCCAGAATGCCGTGCAGAGCATCGAATTCCC
TATCAGGGAGTTCAAGGGTTCCCCACAAATGTAACGCTCCAAAGATTTTTGGAGCTCCAC
GCTCAAATTGCTGGTGAACTTCCAGACCCTACTGCTGGGCAAATTATGGAAAGGTGCAAT
GTTTGCTCAGAAAAAGCGTACTGCGCTTTATGTGCACATTGTGACAAAAAAGTATGTGAT
GACTGCAAATCTGCTCACATGGAGGTATTACGTCGCGAAATTGCAAGAATAAATAATCAA
GTCCGTCGTGGCATGAACAGACTACAAGATATTTTGGGTGTTGTCGAACGCAACACGACG
AATCTCCAAACAAACTGCGCAGCAGTTGCGGGTGAAGTCGACGAAATTCACAAAAGGCTC
GCCAAAGCTCTGAAAGATAGAACCGACTTCTTGCGCACTGAAGTAGATCGGTATCTAGCA
ACTGAGCTTAGAAATCTAACTCATCTCAAAGATAATTTAGAATTAGAATTAAGTAACATA
CAAAGTAATTGTGATCTCGCCGAAAAGCATATGAACGATGACACTGAATGGGAAGACACA
GAACTTATGGACACGAAGGAAATTTTCCTAAAAACTGTGGAATTCTTAAGGAACTTCGAT
TACGAAGCTGGCGATTACAATCGTAGAGTGCGATTCATTATGACGCACGACCCCAACCAA
CTTGTAATGCATGTCGCTAGCTATGGAGAATTGAATATAACTCAACCCAACGCTTATTCT
GGGGGTCTACAGCCAAGTCAAGGTCTAACTAGATCGAAGAGTGACCATCGCTTGGCGACG
CAATTTAGACAGCAGGAAGAATCCAAGAATTACTACGAAAACGATGAACCGATCCTTGGC
GGACGTAAGTTTGGAGAACGTAGACCGCCACCGCCTGAAAGACATACCCGAGACTACAAT
GTCACGGATGACTATAGCGGATATGAGTCTGAGCACCGACCCCGTAGGTTCCGCTCACGT
TTTGTTAGAAGTCACCAACAAGACAACGATTCTGATACAGAACAAAGTATTCGTTCAGCT
AAAACAGAAAAACAAGAGAAGGAAAAAGAGAAAGTTGTAGATACAGAAGATGCTACCAGA
GGACCTCTAAGCGGCATTTTCAGGCTAAGCGATTGTCCACGAGTAATGCAACGAATTATG
GATGCAGAAAGTGGAAAGAAGAAAGAGAAGAAAGAACCTCCGCCACCACCTAAGCCCGTA
GTTCAACCGACACCGCAACCTCGCCGTCCTCCACCTGCTCAAAGGCAACAAAGTGAGGAT
GATGAAATAACACGCCTTAAAAGACAAAACAAAGGCGCAGCTTCATCACAAGAACCAGAT
CGTCCAGCCCCAAGACCTGTTGAAGAAGAAAGAACTTCGATAGCACGCAAACCACCTACA
CCAGCTCGGGAGGCGTCAAGCGATGGTGAATCTGATGAATCAGTCGGATCTTTACAACGT
ACTCAACAACGTAAAGCTCCACCTCCAGTACAAAAACCCGCAGCGACCGGGAGAAGACCA
TCCGCGGATGCTCCTACACCACATAGACCGGCTGCAAGAGCACCTAGCACAGAATCAAGC
GCATCTACAGAAAGTTCTGGCTCGGCGGTTAAGCATACAGGAAACGAGAGAACTGCACCG
GTTACAACCAACGGTACAGCTGGAGGTGCGCAACGGGTACAGAGCCGCTTTGTTGGCTCG
CAGAGACCTACGCCCGCTCCGGCTCCCGCCGAGCCGGCGCACGATGAAGATTCAGATACG
AGTTCCGAAGAGGAAACAGATTCGTCAGAGGAGAGTGAAGAGGAGCCTGCACCTCAAAGA
AAGCCCGAGAGCCAGGCGATGGCTCGTAGTGACATCGGCCCTTTACTTGCGCGTAGTTCA
AATGCTCGCAGTGATGCTCATGATAACAAATCCAAAGATCCTCCACCTTCACAAACTCGG
TACCGATCAAGGCAACCATCTCAAACTGAAGAGGAGCCCGCACCACGATACGGTGCCGGT
TCTTCTTACAACAATCGTTATGGCAGCAAGCCAAGAGAAGAAGAAACGACGTCATCCATA
GATGATGATTCTAAATATCCAACGGCCAGATCGAGATATCTCGCCTTAAAAGAACGGCGA
AACCGTCTCGCAAGAAGTAAAAGTAGTCACACCGGATTCGGTGCGGGAGACGACGATGAT
CAGGACGATCCTGTGTCTCCAACCACGGCATCGCCATCGGCGTATTTGGCGGCTCGGTAC
GGCTCCGGGACCGGAGGGTCGGAGTTGTCTCGTAGCAGGTCATCTCACGCGCTGAAGTCT
AGAGAAAGCTCGCCAGAACGACCACCGACTGGCGAGAAAGATGGAGCAGCACTCAGCTCG
TGGGCACGGTACTTGAAAAACAAGTACGGCTCCCGCGGTAAAGAACGAGACACGAGTGGC
ACGTCCTCGAGCGCGTCGCGTCGTCTGTCTCTCGGGCTGCCTTTGCGCTCGGCAAACGAG
CTTGCCAGTTCTGATGACGATTCAAAAAACGCGGCAGGCTCCCCCATCTCCCCTACGGCG
GCTACAGCAGCGGTAGCAGGTTTCGCAGCAGCAGGTTCCTCCCCTAGGAGCCAGTATCTG
CAGAAACGCCGATTACAGTTCAGCGTGGGGAGTCGGGGGAGCGAACCTGGTTGTTTCACA
TGGCCTCGTGGTATCGCTGTAGGTCCAGATAATACTATGGTCGTGGCCGATTCATCAAAT
CACAGAGTGCAGGTGTTCGACTCTAATGGAATATTCATCAAGGAGTTCGGTCAGTATGGA
AGCGGCGAAGGCGAGTTTGACTGCTTAGCAGGAGTTGCTGTTAACCGCATCGGGCAGTAC
ATCATAGCTGATAGATACAACCATCGCATACAGGTTTTTGACCCTCAAGGTCGCTTCCTA
AGAGCCTTCGGGAGCCAAGGTACCGGAGACGGCAAGTTCAACTACCCATGGGGCATCACC
ACTGACGCCCTCGGATTCATATACGTGTGTGACAAGGAAAACCATAGAGTGCAGGTGTTC
CAATCCGACGGCACCTTCGTGGGTAAATTTGGTTCCTTCGGGGCCAAGCTTGGTCAACTA
GAACATCCTCATTACATTGCGGTTTCCAGCACCAACCGAGTTCTGGTCTCAGACTCGAAC
AACCACAGGATCCAGGTCTTCGATGTAAACGGTAGAGTTCTGTCTTCGTTCGGCGAAGAA
GGGTCCGAAGATGGCCAGTTTAAGTTCCCGAGAGGTGTAGCAGTGGACGACCAAGGCTAC
ATCGTAGTGGCTGATTCCGGTAACAACAGGATCCAGATCTTCCATCCGGATGGAACCTTC
CTCAGGGCGTTTGGCTCTTGGGGCTCCGGAGACGGGGAATTTAAGGGATTAGAGGGAATC
GCTGTCATGACCGGTGGAAATATCATCGTATGTGATCGGGAGAATCATAGGGTGCAAGTG
TTTTAAGTTTCACGAAAACAACAATATTTCATTATTACGTAAACAATAAAATGAACAATA
CTTATAATATATAATAACAATACAATACTGTTTTTATCGGTGGGAACTTTGTAACATTAG
CATTATTAACATTTTACAACGAGGCATTTGTAACATAAATTTAAATAGAAAAAAAAACGA
ATGGAGTTCATACATATTGTAAATTCACATTTTTTATATAAACCAAAGCTTGTGTCTAAA
TAATTTTCATTGTACACATGAATACGCATAGTCTGTTAACGAAATTCTTTCTTAAAAAGA
TTTCTTTTTGTTTTTTTTTAGTTTTTCTATTAATAACACTCAGTGTATTTTTAATGTTTT
GTATATGAATAAATAAATCATACATTTACAACGACCTAGTCATTGATTAAATATTACTTT
TT
(4262 bp)

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