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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9763_c0_seq3
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_protein_nhl-1_isoform_X1_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
Transcript
Level		FPKM:2.48 TPM:2.72
ORF EntryO_BomoFB10318_complete:A_BomoFB_comp9763_c0_seq3
Sequence
(Nucleotide)
GCGGCGCGTTCGCGAGACCACAACGCTGTGATACAAATACTCTAGTCATCATCAACGAAA
ATGACAAATACATAAGCGAGGTTAAGCAAAAATGGAGCAGTTTGAATCGCTGCTGACTTG
CTGCGTGTGTTTGGACCGGTACAGGAACCCTAAGTTGCTGCCATGCCAGCACAGCTTCTG
TATGGAGCCCTGCATGGACGGCCTAGTCGACTACGTTAGACGACAGGTCAAATGTCCAGA
ATGCCGTGCAGAGCATCGAATTCCCTATCAGGGAGTTCAAGGGTTCCCCACAAATGTAAC
GCTCCAAAGATTTTTGGAGCTCCACGCTCAAATTGCTGGTGAACTTCCAGACCCTACTGC
TGGGCAAATTATGGAAAGGTGCAATGTTTGCTCAGAAAAAGCGTACTGCGCTTTATGTGC
ACATTGTGACAAAAAAGTATGTGATGACTGCAAATCTGCTCACATGGAGGTATTACGTCG
CGAAATTGCAAGAATAAATAATCAAGTCCGTCGTGGCATGAACAGACTACAAGATATTTT
GGGTGTTGTCGAACGCAACACGACGAATCTCCAAACAAACTGCGCAGCAGTTGCGGGTGA
AGTCGACGAAATTCACAAAAGGCTCGCCAAAGCTCTGAAAGATAGAACCGACTTCTTGCG
CACTGAAGTAGATCGGTATCTAGCAACTGAGCTTAGAAATCTAACTCATCTCAAAGATAA
TTTAGAATTAGAATTAAGTAACATACAAAGTAATTGTGATCTCGCCGAAAAGCATATGAA
CGATGACACTGAATGGGAAGACACAGAACTTATGGACACGAAGGAAATTTTCCTAAAAAC
TGTGGAATTCTTAAGGAACTTCGATTACGAAGCTGGCGATTACAATCGTAGAGTGCGATT
CATTATGACGCACGACCCCAACCAACTTGTAATGCATGTCGCTAGCTATGGAGAATTGAA
TATAACTCAACCCAACGCTTATTCTGGGGGTCTACAGCCAAGTCAAGGTCTAACTAGATC
GAAGAGTGACCATCGCTTGGCGACGCAATTTAGACAGCAGGAAGAATCCAAGAATTACTA
CGAAAACGATGAACCGATCCTTGGCGGACGTAAGTTTGGAGAACGTAGACCGCCACCGCC
TGAAAGACATACCCGAGACTACAATGTCACGGATGACTATAGCGGATATGAGTCTGAGCA
CCGACCCCGTAGGTTCCGCTCACGTTTTGTTAGAAGTCACCAACAAGACAACGATTCTGA
TACAGAACAAAGTATTCGTTCAGCTAAAACAGAAAAACAAGAGAAGGAAAAAGAGAAAGT
TGTAGATACAGAAGATGCTACCAGAGGACCTCTAAGCGGCATTTTCAGGCTAAGCGATTG
TCCACGAGTAATGCAACGAATTATGGATGCAGAAAGTGGAAAGAAGAAAGAGAAGAAAGA
ACCTCCGCCACCACCTAAGCCCGTAGTTCAACCGACACCGCAACCTCGCCGTCCTCCACC
TGCTCAAAGGCAACAAAGTGAGGATGATGAAATAACACGCCTTAAAAGACAAAACAAAGG
CGCAGCTTCATCACAAGAACCAGATCGTCCAGCCCCAAGACCTGTTGAAGAAGAAAGAAC
TTCGATAGCACGCAAACCACCTACACCAGCTCGGGAGGTGAGTTGGGAAGAAGAACGAGA
GTGAATTAGAATCGCAGTACAACGTAGAATCTAGAAAAATCATCGATACTAACAAGAAAA
ACGCAAAAAAACTAACGGCATTCCATAAATGTACACTCCACGTTAACTCATTGACCTCTT
CAAAAATACACATACACAACACAATTTATTATATCTACCATATTGGTGTCCAAATCGAAT
TTCAATATATTTCTCAGGCGTCAAGCGATGGTGAATCTGATGAATCAGTCGGATCTTTAC
AACGTACTCAACAACGTAAAGCTCCACCTCCAGTACAAAAACCCGCAGCGACCGGGAGAA
GACCATCCGCGGATGCTCCTACACCACATAGACCGGCTGCAAGAGCACCTAGCACAGAAT
CAAGCGCATCTACAGAAAGTTCTGGCTCGGCGGTTAAGCATACAGGTGCAATATTAACCA
TCGCAGAATTAAAAGCAAAATATTGCAGTGGTGGGCCAAAACCAAATCCTCGATTATGTT
CCACAGGAAACGAGAGAACTGCACCGGTTACAACCAACGGTACAGCTGGAGGTGCGCAAC
GGGTACAGAGCCGCTTTGTTGGCTCGCAGAGACCTACGCCCGCTCCGGCTCCCGCCGAGC
CGGCGCACGATGAAGATTCAGATACGAGTTCCGAAGAGGAAACAGATTCGTCAGAGGAGA
GTGAAGAGGAGCCTGCACCTCAAAGAAAGCCCGAGAGCCAGGCGATGGCTCGTAGTGACA
TCGGCCCTTTACTTGCGCGTAGTTCAAATGCTCGCAGTGATGCTCATGATAACAAATCCA
AAGATCCTCCACCTTCACAAACTCGGTACCGATCAAGGCAACCATCTCAAACTGAAGAGG
AGCCCGCACCACGATACGGTGCCGGTTCTTCTTACAACAATCGTTATGGCAGCAAGCCAA
GAGAAGAAGAAACGACGTCATCCATAGATGATGATTCTAAATATCCAACGGCCAGATCGA
GATATCTCGCCTTAAAAGAACGGCGAAACCGTCTCGCAAGAAGTAAAAGTAGTCACACCG
GATTCGGTGCGGGAGACGACGATGATCAGGACGATCCTGTGTCTCCAACCACGGCATCGC
CATCGGCGTATTTGGCGGCTCGGTACGGCTCCGGGACCGGAGGGTCGGAGTTGTCTCGTA
GCAGGTCATCTCACGCGCTGAAGTCTAGAGAAAGCTCGCCAGAACGACCACCGACTGGCG
AGAAAGATGGAGCAGCACTCAGCTCGTGGGCACGGTACTTGAAAAACAAGTACGGCTCCC
GCGGTAAAGAACGAGACACGAGTGGCACGTCCTCGAGCGCGTCGCGTCGTCTGTCTCTCG
GGCTGCCTTTGCGCTCGGCAAACGAGCTTGCCAGTTCTGATGACGATTCAAAAAACGCGG
CAGGCTCCCCCATCTCCCCTACGGCGGCTACAGCAGCGGTAGCAGGTTTCGCAGCAGCAG
GTTCCTCCCCTAGGAGCCAGTATCTGCAGAAACGCCGATTACAGTTCAGCGTGGGGAGTC
GGGGGAGCGAACCTGGTTGTTTCACATGGCCTCGTGGTATCGCTGTAGGTCCAGATAATA
CTATGGTCGTGGCCGATTCATCAAATCACAGAGTGCAGGTGTTCGACTCTAATGGAATAT
TCATCAAGGAGTTCGGTCAGTATGGAAGCGGCGAAGGCGAGTTTGACTGCTTAGCAGGAG
TTGCTGTTAACCGCATCGGGCAGTACATCATAGCTGATAGATACAACCATCGCATACAGG
TTTTTGACCCTCAAGGTCGCTTCCTAAGAGCCTTCGGGAGCCAAGGTACCGGAGACGGCA
AGTTCAACTACCCATGGGGCATCACCACTGACGCCCTCGGATTCATATACGTGTGTGACA
AGGAAAACCATAGAGTGCAGGTGTTCCAATCCGACGGCACCTTCGTGGGTAAATTTGGTT
CCTTCGGGGCCAAGCTTGGTCAACTAGAACATCCTCATTACATTGCGGTTTCCAGCACCA
ACCGAGTTCTGGTCTCAGACTCGAACAACCACAGGATCCAGGTCTTCGATGTAAACGGTA
GAGTTCTGTCTTCGTTCGGCGAAGAAGGGTCCGAAGATGGCCAGTTTAAGTTCCCGAGAG
GTGTAGCAGTGGACGACCAAGGCTACATCGTAGTGGCTGATTCCGGTAACAACAGGATCC
AGATCTTCCATCCGGATGGAACCTTCCTCAGGGCGTTTGGCTCTTGGGGCTCCGGAGACG
GGGAATTTAAGGGATTAGAGGGAATCGCTGTCATGACCGGTGGAAATATCATCGTATGTG
ATCGGGAGAATCATAGGGTGCAAGTGTTTTAAGTTTCACGAAAACAACAATATTTCATTA
TTACGTAAACAATAAAATGAACAATACTTATAATATATAATAACAATACAATACTGTTTT
TATCGGTGGGAACTTTGTAACATTAGCATTATTAACATTTTACAACGAGGCATTTGTAAC
ATAAATTTAAATAGAAAAAAAAACGAATGGAGTTCATACATATTGTAAATTCACATTTTT
TATATAAACCAAAGCTTGTGTCTAAATAATTTTCATTGTACACATGAATACGCATAGTCT
GTTAACGAAATTCTTTCTTAAAAAGATTTCTTTTTGTTTTTTTTTAGTTTTTCTATTAAT
AACACTCAGTGTATTTTTAATGTTTTGTATATGAATAAATAAATCATACATTTACAACGA
CCTAGTCATTGATTAAATATTACTTTTT
(4408 bp)

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