SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9763_c0_seq2
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_protein_nhl-1_isoform_X1_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
Transcript
Level		FPKM:4.72 TPM:5.18
ORF EntryO_BomoFB10314_complete:A_BomoFB_comp9763_c0_seq2
Sequence
(Nucleotide)
GTCAGTCAGTACCGCATTAGTTTCGTTGTGCTAGGCGAGCGCACAAACGTGCGCCGCCAC
ATAGTGAGAAGAATAGGTGCAGAAGTGTATTTAAAGAAGATGCCGTCTTTTTTCACATAG
TGGGATTAGAATCCAACCGATAGTAGAAAGTACTCGAAGGAGAACCGCGTGCGGGCCCAC
CAAATAGGTCGGGCCCGCCACTGCTGAAAGTACTACAAAGCAATACATAAGCGAGGTTAA
GCAAAAATGGAGCAGTTTGAATCGCTGCTGACTTGCTGCGTGTGTTTGGACCGGTACAGG
AACCCTAAGTTGCTGCCATGCCAGCACAGCTTCTGTATGGAGCCCTGCATGGACGGCCTA
GTCGACTACGTTAGACGACAGGTCAAATGTCCAGAATGCCGTGCAGAGCATCGAATTCCC
TATCAGGGAGTTCAAGGGTTCCCCACAAATGTAACGCTCCAAAGATTTTTGGAGCTCCAC
GCTCAAATTGCTGGTGAACTTCCAGACCCTACTGCTGGGCAAATTATGGAAAGGTGCAAT
GTTTGCTCAGAAAAAGCGTACTGCGCTTTATGTGCACATTGTGACAAAAAAGTATGTGAT
GACTGCAAATCTGCTCACATGGAGGTATTACGTCGCGAAATTGCAAGAATAAATAATCAA
GTCCGTCGTGGCATGAACAGACTACAAGATATTTTGGGTGTTGTCGAACGCAACACGACG
AATCTCCAAACAAACTGCGCAGCAGTTGCGGGTGAAGTCGACGAAATTCACAAAAGGCTC
GCCAAAGCTCTGAAAGATAGAACCGACTTCTTGCGCACTGAAGTAGATCGGTATCTAGCA
ACTGAGCTTAGAAATCTAACTCATCTCAAAGATAATTTAGAATTAGAATTAAGTAACATA
CAAAGTAATTGTGATCTCGCCGAAAAGCATATGAACGATGACACTGAATGGGAAGACACA
GAACTTATGGACACGAAGGAAATTTTCCTAAAAACTGTGGAATTCTTAAGGAACTTCGAT
TACGAAGCTGGCGATTACAATCGTAGAGTGCGATTCATTATGACGCACGACCCCAACCAA
CTTGTAATGCATGTCGCTAGCTATGGAGAATTGAATATAACTCAACCCAACGCTTATTCT
GGGGGTCTACAGCCAAGTCAAGGTCTAACTAGATCGAAGAGTGACCATCGCTTGGCGACG
CAATTTAGACAGCAGGAAGAATCCAAGAATTACTACGAAAACGATGAACCGATCCTTGGC
GGACGTAAGTTTGGAGAACGTAGACCGCCACCGCCTGAAAGACATACCCGAGACTACAAT
GTCACGGATGACTATAGCGGATATGAGTCTGAGCACCGACCCCGTAGGTTCCGCTCACGT
TTTGTTAGAAGTCACCAACAAGACAACGATTCTGATACAGAACAAAGTATTCGTTCAGCT
AAAACAGAAAAACAAGAGAAGGAAAAAGAGAAAGTTGTAGATACAGAAGATGCTACCAGA
GGACCTCTAAGCGGCATTTTCAGGCTAAGCGATTGTCCACGAGTAATGCAACGAATTATG
GATGCAGAAAGTGGAAAGAAGAAAGAGAAGAAAGAACCTCCGCCACCACCTAAGCCCGTA
GTTCAACCGACACCGCAACCTCGCCGTCCTCCACCTGCTCAAAGGCAACAAAGTGAGGAT
GATGAAATAACACGCCTTAAAAGACAAAACAAAGGCGCAGCTTCATCACAAGAACCAGAT
CGTCCAGCCCCAAGACCTGTTGAAGAAGAAAGAACTTCGATAGCACGCAAACCACCTACA
CCAGCTCGGGAGGTGAGTTGGGAAGAAGAACGAGAGTGAATTAGAATCGCAGTACAACGT
AGAATCTAGAAAAATCATCGATACTAACAAGAAAAACGCAAAAAAACTAACGGCATTCCA
TAAATGTACACTCCACGTTAACTCATTGACCTCTTCAAAAATACACATACACAACACAAT
TTATTATATCTACCATATTGGTGTCCAAATCGAATTTCAATATATTTCTCAGGCGTCAAG
CGATGGTGAATCTGATGAATCAGTCGGATCTTTACAACGTACTCAACAACGTAAAGCTCC
ACCTCCAGTACAAAAACCCGCAGCGACCGGGAGAAGACCATCCGCGGATGCTCCTACACC
ACATAGACCGGCTGCAAGAGCACCTAGCACAGAATCAAGCGCATCTACAGAAAGTTCTGG
CTCGGCGGTTAAGCATACAGGTGCAATATTAACCATCGCAGAATTAAAAGCAAAATATTG
CAGTGGTGGGCCAAAACCAAATCCTCGATTATGTTCCACAGGAAACGAGAGAACTGCACC
GGTTACAACCAACGGTACAGCTGGAGGTGCGCAACGGGTACAGAGCCGCTTTGTTGGCTC
GCAGAGACCTACGCCCGCTCCGGCTCCCGCCGAGCCGGCGCACGATGAAGATTCAGATAC
GAGTTCCGAAGAGGAAACAGATTCGTCAGAGGAGAGTGAAGAGGAGCCTGCACCTCAAAG
AAAGCCCGAGAGCCAGGCGATGGCTCGTAGTGACATCGGCCCTTTACTTGCGCGTAGTTC
AAATGCTCGCAGTGATGCTCATGATAACAAATCCAAAGATCCTCCACCTTCACAAACTCG
GTACCGATCAAGGCAACCATCTCAAACTGAAGAGGAGCCCGCACCACGATACGGTGCCGG
TTCTTCTTACAACAATCGTTATGGCAGCAAGCCAAGAGAAGAAGAAACGACGTCATCCAT
AGATGATGATTCTAAATATCCAACGGCCAGATCGAGATATCTCGCCTTAAAAGAACGGCG
AAACCGTCTCGCAAGAAGTAAAAGTAGTCACACCGGATTCGGTGCGGGAGACGACGATGA
TCAGGACGATCCTGTGTCTCCAACCACGGCATCGCCATCGGCGTATTTGGCGGCTCGGTA
CGGCTCCGGGACCGGAGGGTCGGAGTTGTCTCGTAGCAGGTCATCTCACGCGCTGAAGTC
TAGAGAAAGCTCGCCAGAACGACCACCGACTGGCGAGAAAGATGGAGCAGCACTCAGCTC
GTGGGCACGGTACTTGAAAAACAAGTACGGCTCCCGCGGTAAAGAACGAGACACGAGTGG
CACGTCCTCGAGCGCGTCGCGTCGTCTGTCTCTCGGGCTGCCTTTGCGCTCGGCAAACGA
GCTTGCCAGTTCTGATGACGATTCAAAAAACGCGGCAGGCTCCCCCATCTCCCCTACGGC
GGCTACAGCAGCGGTAGCAGGTTTCGCAGCAGCAGGTTCCTCCCCTAGGAGCCAGTATCT
GCAGAAACGCCGATTACAGTTCAGCGTGGGGAGTCGGGGGAGCGAACCTGGTTGTTTCAC
ATGGCCTCGTGGTATCGCTGTAGGTCCAGATAATACTATGGTCGTGGCCGATTCATCAAA
TCACAGAGTGCAGGTGTTCGACTCTAATGGAATATTCATCAAGGAGTTCGGTCAGTATGG
AAGCGGCGAAGGCGAGTTTGACTGCTTAGCAGGAGTTGCTGTTAACCGCATCGGGCAGTA
CATCATAGCTGATAGATACAACCATCGCATACAGGTTTTTGACCCTCAAGGTCGCTTCCT
AAGAGCCTTCGGGAGCCAAGGTACCGGAGACGGCAAGTTCAACTACCCATGGGGCATCAC
CACTGACGCCCTCGGATTCATATACGTGTGTGACAAGGAAAACCATAGAGTGCAGGTGTT
CCAATCCGACGGCACCTTCGTGGGTAAATTTGGTTCCTTCGGGGCCAAGCTTGGTCAACT
AGAACATCCTCATTACATTGCGGTTTCCAGCACCAACCGAGTTCTGGTCTCAGACTCGAA
CAACCACAGGATCCAGGTCTTCGATGTAAACGGTAGAGTTCTGTCTTCGTTCGGCGAAGA
AGGGTCCGAAGATGGCCAGTTTAAGTTCCCGAGAGGTGTAGCAGTGGACGACCAAGGCTA
CATCGTAGTGGCTGATTCCGGTAACAACAGGATCCAGATCTTCCATCCGGATGGAACCTT
CCTCAGGGCGTTTGGCTCTTGGGGCTCCGGAGACGGGGAATTTAAGGGATTAGAGGGAAT
CGCTGTCATGACCGGTGGAAATATCATCGTATGTGATCGGGAGAATCATAGGGTGCAAGT
GTTTTAAGTTTCACGAAAACAACAATATTTCATTATTACGTAAACAATAAAATGAACAAT
ACTTATAATATATAATAACAATACAATACTGTTTTTATCGGTGGGAACTTTGTAACATTA
GCATTATTAACATTTTACAACGAGGCATTTGTAACATAAATTTAAATAGAAAAAAAAACG
AATGGAGTTCATACATATTGTAAATTCACATTTTTTATATAAACCAAAGCTTGTGTCTAA
ATAATTTTCATTGTACACATGAATACGCATAGTCTGTTAACGAAATTCTTTCTTAAAAAG
ATTTCTTTTTGTTTTTTTTTAGTTTTTCTATTAATAACACTCAGTGTATTTTTAATGTTT
TGTATATGAATAAATAAATCATACATTTACAACGACCTAGTCATTGATTAAATATTACTT
TTT
(4563 bp)

- SilkBase 1999-2023 -