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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9763_c0_seq1
Scaffold_idBomo_Chr8
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_protein_nhl-1_isoform_X2_[Amyelois_transitella]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0046872 F metal ion binding
Transcript
Level		FPKM:0.42 TPM:0.46
ORF EntryO_BomoFB10310_complete:A_BomoFB_comp9763_c0_seq1
Sequence
(Nucleotide)
GTCAGTCAGTACCGCATTAGTTTCGTTGTGCTAGGCGAGCGCACAAACGTGCGCCGCCAC
ATAGTGAGAAGAATAGGTGCAGAAGTGTATTTAAAGAAGATGCCGTCTTTTTTCACATAG
TGGGATTAGAATCCAACCGATAGTAGAAAGTACTCGAAGGAGAACCGCGTGCGGGCCCAC
CAAATAGGTCGGGCCCGCCACTGCTGAAAGTACTACAAAGCAATACATAAGCGAGGTTAA
GCAAAAATGGAGCAGTTTGAATCGCTGCTGACTTGCTGCGTGTGTTTGGACCGGTACAGG
AACCCTAAGTTGCTGCCATGCCAGCACAGCTTCTGTATGGAGCCCTGCATGGACGGCCTA
GTCGACTACGTTAGACGACAGGTCAAATGTCCAGAATGCCGTGCAGAGCATCGAATTCCC
TATCAGGGAGTTCAAGGGTTCCCCACAAATGTAACGCTCCAAAGATTTTTGGAGCTCCAC
GCTCAAATTGCTGGTGAACTTCCAGACCCTACTGCTGGGCAAATTATGGAAAGGTGCAAT
GTTTGCTCAGAAAAAGCGTACTGCGCTTTATGTGCACATTGTGACAAAAAAGTATGTGAT
GACTGCAAATCTGCTCACATGGAGGTATTACGTCGCGAAATTGCAAGAATAAATAATCAA
GTCCGTCGTGGCATGAACAGACTACAAGATATTTTGGGTGTTGTCGAACGCAACACGACG
AATCTCCAAACAAACTGCGCAGCAGTTGCGGGTGAAGTCGACGAAATTCACAAAAGGCTC
GCCAAAGCTCTGAAAGATAGAACCGACTTCTTGCGCACTGAAGTAGATCGGTATCTAGCA
ACTGAGCTTAGAAATCTAACTCATCTCAAAGATAATTTAGAATTAGAATTAAGTAACATA
CAAAGTAATTGTGATCTCGCCGAAAAGCATATGAACGATGACACTGAATGGGAAGACACA
GAACTTATGGACACGAAGGAAATTTTCCTAAAAACTGTGGAATTCTTAAGGAACTTCGAT
TACGAAGCTGGCGATTACAATCGTAGAGTGCGATTCATTATGACGCACGACCCCAACCAA
CTTGTAATGCATGTCGCTAGCTATGGAGAATTGAATATAACTCAACCCAACGCTTATTCT
GGGGGTCTACAGCCAAGTCAAGGTCTAACTAGATCGAAGAGTGACCATCGCTTGGCGACG
CAATTTAGACAGCAGGAAGAATCCAAGAATTACTACGAAAACGATGAACCGATCCTTGGC
GGACGTAAGTTTGGAGAACGTAGACCGCCACCGCCTGAAAGACATACCCGAGACTACAAT
GTCACGGATGACTATAGCGGATATGAGTCTGAGCACCGACCCCGTAGGTTCCGCTCACGT
TTTGTTAGAAGTCACCAACAAGACAACGATTCTGATACAGAACAAAGTATTCGTTCAGCT
AAAACAGAAAAACAAGAGAAGGAAAAAGAGAAAGTTGTAGATACAGAAGATGCTACCAGA
GGACCTCTAAGCGGCATTTTCAGGCTAAGCGATTGTCCACGAGTAATGCAACGAATTATG
GATGCAGAAAGTGGAAAGAAGAAAGAGAAGAAAGAACCTCCGCCACCACCTAAGCCCGTA
GTTCAACCGACACCGCAACCTCGCCGTCCTCCACCTGCTCAAAGGCAACAAAGTGAGGAT
GATGAAATAACACGCCTTAAAAGACAAAACAAAGGCGCAGCTTCATCACAAGAACCAGAT
CGTCCAGCCCCAAGACCTGTTGAAGAAGAAAGAACTTCGATAGCACGCAAACCACCTACA
CCAGCTCGGGAGGTGAGTTGGGAAGAAGAACGAGAGTGAATTAGAATCGCAGTACAACGT
AGAATCTAGAAAAATCATCGATACTAACAAGAAAAACGCAAAAAAACTAACGGCATTCCA
TAAATGTACACTCCACGTTAACTCATTGACCTCTTCAAAAATACACATACACAACACAAT
TTATTATATCTACCATATTGGTGTCCAAATCGAATTTCAATATATTTCTCAGGCGTCAAG
CGATGGTGAATCTGATGAATCAGTCGGATCTTTACAACGTACTCAACAACGTAAAGCTCC
ACCTCCAGTACAAAAACCCGCAGCGACCGGGAGAAGACCATCCGCGGATGCTCCTACACC
ACATAGACCGGCTGCAAGAGCACCTAGCACAGAATCAAGCGCATCTACAGAAAGTTCTGG
CTCGGCGGTTAAGCATACAGGAAACGAGAGAACTGCACCGGTTACAACCAACGGTACAGC
TGGAGGTGCGCAACGGGTACAGAGCCGCTTTGTTGGCTCGCAGAGACCTACGCCCGCTCC
GGCTCCCGCCGAGCCGGCGCACGATGAAGATTCAGATACGAGTTCCGAAGAGGAAACAGA
TTCGTCAGAGGAGAGTGAAGAGGAGCCTGCACCTCAAAGAAAGCCCGAGAGCCAGGCGAT
GGCTCGTAGTGACATCGGCCCTTTACTTGCGCGTAGTTCAAATGCTCGCAGTGATGCTCA
TGATAACAAATCCAAAGATCCTCCACCTTCACAAACTCGGTACCGATCAAGGCAACCATC
TCAAACTGAAGAGGAGCCCGCACCACGATACGGTGCCGGTTCTTCTTACAACAATCGTTA
TGGCAGCAAGCCAAGAGAAGAAGAAACGACGTCATCCATAGATGATGATTCTAAATATCC
AACGGCCAGATCGAGATATCTCGCCTTAAAAGAACGGCGAAACCGTCTCGCAAGAAGTAA
AAGTAGTCACACCGGATTCGGTGCGGGAGACGACGATGATCAGGACGATCCTGTGTCTCC
AACCACGGCATCGCCATCGGCGTATTTGGCGGCTCGGTACGGCTCCGGGACCGGAGGGTC
GGAGTTGTCTCGTAGCAGGTCATCTCACGCGCTGAAGTCTAGAGAAAGCTCGCCAGAACG
ACCACCGACTGGCGAGAAAGATGGAGCAGCACTCAGCTCGTGGGCACGGTACTTGAAAAA
CAAGTACGGCTCCCGCGGTAAAGAACGAGACACGAGTGGCACGTCCTCGAGCGCGTCGCG
TCGTCTGTCTCTCGGGCTGCCTTTGCGCTCGGCAAACGAGCTTGCCAGTTCTGATGACGA
TTCAAAAAACGCGGCAGGCTCCCCCATCTCCCCTACGGCGGCTACAGCAGCGGTAGCAGG
TTTCGCAGCAGCAGGTTCCTCCCCTAGGAGCCAGTATCTGCAGAAACGCCGATTACAGTT
CAGCGTGGGGAGTCGGGGGAGCGAACCTGGTTGTTTCACATGGCCTCGTGGTATCGCTGT
AGGTCCAGATAATACTATGGTCGTGGCCGATTCATCAAATCACAGAGTGCAGGTGTTCGA
CTCTAATGGAATATTCATCAAGGAGTTCGGTCAGTATGGAAGCGGCGAAGGCGAGTTTGA
CTGCTTAGCAGGAGTTGCTGTTAACCGCATCGGGCAGTACATCATAGCTGATAGATACAA
CCATCGCATACAGGTTTTTGACCCTCAAGGTCGCTTCCTAAGAGCCTTCGGGAGCCAAGG
TACCGGAGACGGCAAGTTCAACTACCCATGGGGCATCACCACTGACGCCCTCGGATTCAT
ATACGTGTGTGACAAGGAAAACCATAGAGTGCAGGTGTTCCAATCCGACGGCACCTTCGT
GGGTAAATTTGGTTCCTTCGGGGCCAAGCTTGGTCAACTAGAACATCCTCATTACATTGC
GGTTTCCAGCACCAACCGAGTTCTGGTCTCAGACTCGAACAACCACAGGATCCAGGTCTT
CGATGTAAACGGTAGAGTTCTGTCTTCGTTCGGCGAAGAAGGGTCCGAAGATGGCCAGTT
TAAGTTCCCGAGAGGTGTAGCAGTGGACGACCAAGGCTACATCGTAGTGGCTGATTCCGG
TAACAACAGGATCCAGATCTTCCATCCGGATGGAACCTTCCTCAGGGCGTTTGGCTCTTG
GGGCTCCGGAGACGGGGAATTTAAGGGATTAGAGGGAATCGCTGTCATGACCGGTGGAAA
TATCATCGTATGTGATCGGGAGAATCATAGGGTGCAAGTGTTTTAAGTTTCACGAAAACA
ACAATATTTCATTATTACGTAAACAATAAAATGAACAATACTTATAATATATAATAACAA
TACAATACTGTTTTTATCGGTGGGAACTTTGTAACATTAGCATTATTAACATTTTACAAC
GAGGCATTTGTAACATAAATTTAAATAGAAAAAAAAACGAATGGAGTTCATACATATTGT
AAATTCACATTTTTTATATAAACCAAAGCTTGTGTCTAAATAATTTTCATTGTACACATG
AATACGCATAGTCTGTTAACGAAATTCTTTCTTAAAAAGATTTCTTTTTGTTTTTTTTTA
GTTTTTCTATTAATAACACTCAGTGTATTTTTAATGTTTTGTATATGAATAAATAAATCA
TACATTTACAACGACCTAGTCATTGATTAAATATTACTTTTT
(4482 bp)

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