SilkBase IMG001 IMG002 IMG003 IMG005 IMG006 IMG007 IMG008 IMG009 kuwako IMG010 IMG011 IMG012

Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9749_c0_seq6
Scaffold_idBomo_Chr12
NCBI non-redundant
(nr)		PREDICTED:_E3_ubiquitin-protein_ligase_HECTD1_isoform_X2_[Bombyx_mori]
Ontology
GO:0004842 F ubiquitin-protein transferase activity
GO:0005515 F protein binding
GO:0005634 C nucleus
GO:0005737 C cytoplasm
GO:0016567 P protein ubiquitination
GO:0016874 F ligase activity
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0046872 F metal ion binding
Transcript
Level		FPKM:1.74 TPM:1.91
ORF EntryO_BomoFB10243_5prime_partial:A_BomoFB_comp9749_c0_seq6
Sequence
(Nucleotide)
CGCGGCGTGTGTGCGGGCGCGCGCGTCTCCCGCGGCCCCGACTGGAAGTGGCGCGACCAG
GACGGGCCGCACCCCGCACTCGGCACTCTCACTTCCGAACTGCACAACGGGTGGGTCGAT
GTCAGGTGGGACCACGGAGTTCGCAATTCGTATCGCATGGGTGCAGAGGGAAAGTTCGAC
TTGAAAGTTGTGAGCGGTGGTACTGTCATCGAAAGTTCAAAAGCCAGCCGGAAGAGTCAC
TCAACTCCCAGTTTGCCTGACGCCTTCTGTCGATCAGGTATCAGTAGCGTCGACGGAACA
GGCCTCGTCAGCGGACAATATATCGAGTGAAGAGATGGTCAGTAATATGTCAAGACCCCG
TACGCACGCCACAGATCTCTCTGCCATTAATAATTCGACGCATCATATAAACTCTGATCT
CGCGACAATAGTGGAGTCATTGACGTTGGGCGCCGAAAGTAACAATTGCATCACCGAGTT
GGGGAATACATCGTTTACCAACATGGAAATGGGACCTACGAGCATTACGGATATCACCAA
ACCTTATCCCGCCAAAGAGCCGTTACCCGAATCCAGTGCACACGAGTGCGACGAAAATGA
AGCCGGGGAAAGTCAATACGGTGATAATAAGAAGGAAAGTCAGTCCGGTTCGGGCACCAT
GAGCGCTAGCGAACCTGATTTGACGCAGCAGGGCACAGGACGCCTGTTGGAGTCGCTGGG
CGTGGGCCGCGGCAACAGTGCAGGACGAGGCAGCAACGTGCCGCGCTCGAACCGTAACAA
TCATTCCTCTGGTCTCCTACCTAGGTATTTATTATTTTATTTTATTTATTGGATGTCAAC
ATGTTATACATCTGCACAGGACATTACAGGTAATGCATATATTGG
(885 bp)

- SilkBase 1999-2023 -