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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9716_c0_seq2
Scaffold_idBomo_Scaf003
NCBI non-redundant
(nr)		PREDICTED:_RING_finger_and_CHY_zinc_finger_domain-containing_protein_1_[Papilio_polytes]
Ontology
GO:0000151 C ubiquitin ligase complex
GO:0002039 F p53 binding
GO:0004842 F ubiquitin-protein transferase activity
GO:0005102 F signaling receptor binding
GO:0005634 C nucleus
GO:0005654 C nucleoplasm
GO:0005737 C cytoplasm
GO:0008270 F zinc ion binding
GO:0016567 P protein ubiquitination
GO:0016607 C nuclear speck
GO:0016874 F ligase activity
GO:0031398 P positive regulation of protein ubiquitination
GO:0032436 P positive regulation of proteasomal ubiquitin-dependent protein catabolic process
GO:0042787 P ubiquitin-dependent protein catabolic process
GO:0042803 F protein homodimerization activity
GO:0046872 F metal ion binding
GO:0051865 P protein autoubiquitination
Transcript
Level		FPKM:0.77 TPM:0.84
ORF EntryO_BomoFB10135_complete:A_BomoFB_comp9716_c0_seq2
Sequence
(Nucleotide)
AGCATTAGATACCGATCGAGTAACCGAGACGATTTTCATTTTAAGAAAAAAAAACTAAAA
GATAATCTTATTAGTGAAAATTATTATCACATAAATGATTTTCTTAGGGACGACATTGAA
AATAAATTGACTTTTTAATTATTAGTTGAATTATGGATGAATGAATAGTAAATTATATAA
TATTATAATATCTTGCACTGCACTAAAATTCGCATGTCAAATAATCACAAAGCGTACACG
CTGCTTTTAATTTATGTAATAACTCATTTTCACTATGCTTGGCGAATAAATGATTTCTTT
CTTTCTTTCTATGGTAACCGCTTAGCACCAGGCGGGTCGAGGACTCATATGTTCACGTAT
AGCACACGAATACAAAAATGCAGATGAACATCGTCTAGGAGCTGCTTGTGGGTTGGGACG
GATCGTCCTGGGGGTGGCGAGGGCGGGTCAGGCCTGGGGCGGCTCGTCCAGCGGGTTGGC
GGTGGGCAGGTCGTGGTGCGGCGCCGGGGGAGCGCGGGGCGACGGCGCTGACGACGCTGA
CGACGCCGACGATGAACTTGACGCGTCTCCCGATTCAGTACTCCCGCTCTCCTTATGGAA
CCCGTTCGTCTGACACGTGTTGTAGGCTCCGCAATGTTGACATTTCAGTCCTACGACGTG
AAACTTCACCGTTGACAGCTTATGACAATCCTTGCACAGTATCGTGGCCTTGTAGTCGGC
GTATTCGGACGGCATCGGTGTGGCCGCTACTTCGGAATCCAGATAATTCCAGAGATTCGA
CATGTCGATCATGCTCGTCTGGCACGTGGGGCACGCGTAGTGGCCGGAGTGCAGCAGCTG
CTCGAAGCAGGGCCGGTGCAGCAGGTGGCCGCAGTCCGGGATGTGGCACGGGATGCGGGA
CGTGTGGATGTCCTCCAGGCACACGGGGCAGTTCGAACGGGACACGTTCTCTACGCACCT
ATGTCCGACCCTTTGCAGCTGAACAGGCAGGCACATGTTGCAGCGTTCACAATGGAAGAA
CCTATCGCGGCCTCCTACACGACATATGCCGCATCCGTCGCAGTGATACTGTTTCTTATC
TTCATCATCAAACAGGTTGCAGATCAAACAAGTGTACTTTCCAAACCTAACTCCACAGTT
CTGGCATTCTGGCTGCACCTTTTGTCTTGTGTCGCACTCGGTGCATATCAGCTCTGTAAC
AGTCTTCCTATTGAAATAGTGTTGTTCGTTTTCATCATGACAGTAACGGCAGATGTACAC
TTTGTTACAGCATGGAGTCACAAACTTCGCTCGCCGTTTGTAATGAGCACAGCCTATGCG
TTTTTCACCGTTTTGTTCAGCAACTGTGGAACTATCGCCGTTTACACTTTCTGACTTTTC
CTTCGACATTATGTAGTCTGGAATACAAACCAATTACCTTTAATAAAAGCTCAAGGTCTA
CACACGTTATACACTATTGATTCTTGCAATAATTTCATTGAATGAGATCCTAAATATCAC
TTAGGTTTGGTCATTGGTATCGATGTTGTCATGATTGTCGTGACATTTAGGTTGTTAATA
TGCACGTTCCAGGAGGAAAATAAGTTTTTTAATGTTTTACGGTGAAACAACCGTATTTCA
AACGAATTAAGAGCGAAAG
(1639 bp)

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