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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9712_c0_seq1
Scaffold_idBomo_Chr25
NCBI non-redundant
(nr)		PREDICTED:_pre-mRNA-processing_factor_39_isoform_X2_[Papilio_polytes]
Ontology
GO:0000243 C commitment complex
GO:0000381 P regulation of alternative mRNA splicing, via spliceosome
GO:0000395 P mRNA 5'-splice site recognition
GO:0000398 P mRNA splicing, via spliceosome
GO:0005634 C nucleus
GO:0005685 C U1 snRNP
GO:0006396 P RNA processing
GO:0006397 P mRNA processing
GO:0008380 P RNA splicing
GO:0030627 F pre-mRNA 5'-splice site binding
GO:0071004 C U2-type prespliceosome
Transcript
Level		FPKM:2.03 TPM:2.23
ORF EntryO_BomoFB10119_complete:A_BomoFB_comp9712_c0_seq1
Sequence
(Nucleotide)
CGGTTATACAACTCTCCGGTGTGACCTGACGTCTTTCGTATACGAACATCGTAGACCTCG
TTGCACTCTAAGCACTTCTTTTTACTTCCTTTACGTTTTTCATAATCTGCAAACTTTCTC
CAATATCCATAGCAATAAGGATAGTGGGATAAAAAGGCGTCATAGGCTTCACGTGCAGCT
TCAACATCGCTCTCTTGATCGACATATTGTAATAGGTAGGTCCACCCAGTGAAGTCAGTC
GGATCATCATTCACAACTTTCCAGTACTTTTCCAATTCCGGTAAAACTTTCTTTTTAGGT
TTTTCATCAACTGAAGGTCTCTTTTCGGCAGGTATGGGCTTGCTTTCGCCGTTCTTGGTA
ATAGCTTGTTTTTTTGTGGAAGATTCACCTTCTGATGTTGGTGATCCTGGATCATAATTA
CTTCTCTCTTCATCTGGTTTTCGTTTTCTAGACTCTTTCTTGGATGCAGGTAGCTCATCT
TCTGATACAACCTCTGTATCAGCAGGCAGTTCTGCAGGTTTCGGCCCCGGCAACTCATCA
TCAGATACATTCTCAGCATCTTTGATGCTCGGCTTTTGCACTTCAGGAAGTTCATCCTCT
GATACTACTTCTGTTTCTTCAGCACCACCAATCTTACTTGCTGAGTCTTGTGATTGTTCT
TTGATATCATCTACTTCTCTTTGGTTTTTAAACTCTTTGCCTTCATCCTGCTTAATCACT
GGATCTTTTACTGGACTGCTACATGGCTCAACAATTTCCAATTGCTCTGATTTATCCACA
TTTAAATTTACATGCTCAGTGGCGAAGTTAGAGTCATTGCCAGAGTTTTCATTTATCTCT
CCTACATTGGAATCTGTTGCATGTTGACTTTCAGACTGCCTACTGTCTGTGTCTAAAACT
GCTTTGTGGGATGCAGAGTCACTTTGAATAGAATTATCTTCAGTCAATGCGCTATTTAGA
GAATCATTGGGAAAAGTTACAGCATTATCACCAATGTCAAAAGAATCTGTACTGAAGCGA
GGGCCGTTGTTTTCGAGGTAGTCACCAGCGCTTCCAGCTGATAATTCCACGGCGTTCAAG
AAACATTGATTAGATGTCGACGACTCATCAACAGCAGCATCGACACTATTAAATTCGCCC
TCTGTTAACAAATGAGAAAGTCCGTTGGAGTTCTCATTTATCAAAGGACCTTCGTCTGTA
TCCATGGGATTTTCAGATCCTTTCTGATTATCGGAGCTTGTTTCATCTTCCATGTTTCAA
GTTTAGAAATCTGGTAGAACGAGATATATCGATCAAACACTACAATCTAAGCGAAACAGC
TATAGTAGTAGTTTGAGTTGGAAAAGTATTTAGTCGCTACGTTTTATTTCGTATTTGGAC
GCAATTTGCTTTAGTTTATCGCTTTTTGAGCTTTTAGCTTCTCTTTTGAACATAAG
(1436 bp)

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