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Last updated: 2022/11/18

Bombyx mori Assembled RNA-Seq Entry

NameA_BomoFB_comp9711_c0_seq1
Scaffold_idBomo_Chr17
NCBI non-redundant
(nr)		Transposon_Ty3-G_Gag-Pol_polyprotein_[Papilio_machaon]
Ontology
GO:0003676 F nucleic acid binding
GO:0003677 F DNA binding
GO:0003723 F RNA binding
GO:0003824 F catalytic activity
GO:0003887 F DNA-directed DNA polymerase activity
GO:0003964 F RNA-directed DNA polymerase activity
GO:0004190 F aspartic-type endopeptidase activity
GO:0004518 F nuclease activity
GO:0004519 F endonuclease activity
GO:0005575 C cellular_component
GO:0006278 P RNA-dependent DNA biosynthetic process
GO:0006310 P DNA recombination
GO:0006508 P proteolysis
GO:0008152 P metabolic process
GO:0008233 F peptidase activity
GO:0015074 P DNA integration
GO:0016740 F transferase activity
GO:0016779 F nucleotidyltransferase activity
GO:0016787 F hydrolase activity
GO:0046872 F metal ion binding
GO:0071897 P DNA biosynthetic process
GO:0090305 P nucleic acid phosphodiester bond hydrolysis
Transcript
Level		FPKM:1.51 TPM:1.65
ORF EntryO_BomoFB10115_5prime_partial:A_BomoFB_comp9711_c0_seq1
Sequence
(Nucleotide)
AAAAAAACGATGTTCACATCCCTAGATTTAGCATCCGGCTACTACCAGATACCAATAGAA
GAAGGTTCGCGTCACAAAACCGCATTCGTGACTCCAGACGGTCAATTTGAATATAATCGG
ATGCCATTTGGATTGGTGAATGCACCAGCGGTATTTCAAAGAACTATAAATACTATCCTG
GCGGAAGCCAAAATTAAGTATGCCCTTGTTTATATGGATGACATATTAATTCCCTCAAAG
AATTTTGAAGAAGGAATGACCAGATTAACGGAAGTACTGGAACTTTTGCGAAGTGGAGGG
CTCACTTTGAAAATGAGCAAATGTAGCTTCTTCCTCGACGAGATTGACTTTCTTGGATTT
GAGGTTAGCGCAAAAGGTATTCGACCAGGGTGCAGAAAGACCGAAGCGGTGTCTAATTTT
CCTAAGCCCAAAAACCAACATGAACTACGTCAATTTTTAGGATTATCGGGGTTTTTTAGA
AGATTTATCAAAAACTACGCATTGGTAGCTGCGCCTCTAACTGAACTTCTTAAGAAGGAT
CAAGAGTGGATATGGAACGAACAAAGAGAAAAATCCTTCACACACATCAAGGAGCTCTTG
CATAAACGACCCTTGCTCGCTCTGTATGATCCACTGGCAGAGACTGAACTCCATACCGAC
GCTAGTAAACAAGGCTTAGCTGGTATCTTACTTCAACGTAACGAGAAAGGCGCCCGGCAG
CCAGTGTCTTATTTTAGTCGAAAAACCACCCCAGATGAACAGCGATACCATTCCTATGAA
CTAGAAACCTTAGCTATTATAGCGTCATTAAATCGGTTTAGAATCTACCTTCTCGGCATA
CCTTTTACTATAATTACCGACTGTAGCGCGATCCGCGCTACGCTTATAAAAAGGGACTTG
GTGCCTCGTATAGCGAGGTGGTGGATCCAACTCCAAGAATATGATTGCACTATTGAATAT
AGACCCGGATCGAGGATGTCCCACGTCGACGCGCTCAGTCGTAATCCGATAGACACCCTA
ACAAATGAGGATCACGTCCTTGACGTACTAACCACTGAAACGGACGAACAAGATTGGATC
ACCACCGTACAATCTGCAGACGATGAAATTGCACAAATAAGGAATATTTTATGTAATCAT
GATACCGAGAATATAGCGAACGTATTTAAACATTTCAAATTAAAAAATGGGCGTATCTAC
CGTATTGTGGGCGATGAGATAAAGTGGGTCGTTCCAAAAGGGGCCCGGTGGCAGATCTTG
AAGAGAAACCACGATGATGTCGGCCATTACGGCTTTGAAAAGACTCTTGAACGTATAAGG
AAACATTACTGGTTTGGACGCATGAGGCGTTTCGTAAAGAAATACGTATCGGCTTGTCTA
GAATGTGCTCATCACAAGGTACCAGGGGGTAAACGTGAAGGAGAACTGCATCCCATTGAA
AAGATCGGCGTGTCCTTCCACACAATCCACGCAGACCACCTAGGACCTTTTGTCAGGAGC
AAAGCGGGGAACTGCTATATACTATCATTAATAGATAGTTTCACTAAATTTATAAATATC
ACTCCAGTCAAAAACACGAAATCAGCGACTACAATCAAAGTCCTGAAAGACCACGTCAGT
TTCTTCGGAGTCCCAACGCGCCTCATTACTGATAGGGGGTCTAGTTTCACCAGTAAAATG
TTTAAAGACTTTACAAAAGATTGTGGAATAAAACATATATTAAACGCTGTCGCGACCCCG
AGGGCAAATGGTCAGATAGAAAGATTTAACCGAACCATAACAGAAGCATTAGCTACTTCG
AATCATGGCCGTGATGAACGATGTTGGGACGAACGGATTCACGATATACAAATAGGTCTG
AACACGACAATCCACAAGACAACGCAAAAGTCGCCATCCGAACTACTGTTCGGATTTAAT
ATAAACCATAGAGCGGAAGGAATTTTGAGCACAATAATAAATGACACGCTTAATATAATA
CCACTAGATGAGTTAGACTCCGTGAGAGATAATGTTTTGAAACGCATGGAAATTCAACAA
GAAAAAGATTCTGAGCGATTCAATAAAAATAGAAAACAGTGTAAAAAGTATGAAGTAGGA
GATCTAATCCGAATAGAAAGGCATGTGTCCAACGATGGTCACCCAAAGAAACTTTTAATG
AAATATCAGGGTCCTTACCGCATCTTGAAAGTCTTGGAACACGATAGGTTTTTAGTCGAA
GACACTCCGTTGTCTCGTAAGGGCGGTCGTCGTTACGAAGGTGTTGTCGCCATAGACAAA
ATTCAACCCTGGACAAGCTTTAATCGAAACTTCGATGATGACTCAAGCGAAGACGATGAC
GAGGATGACAAAGACAATGATGATGAAGACAGGAAGGATCAAGCGGGTAATTGACGTAGA
TGTAGGCAGCAGTGATTAGAAGTGATTAGAATTAGGCAGAAGTGATTAGAATAGCAATGT
AACCAGTAACGTTAATGCTAATGAGATTCGCCTCGATTAAAAGTTGAGTCCGTCATAATA
ATGTAATACTTTAACTATGTTGTAAGGCATTGCAAGTAGACAGGAAGAGAGTGGTTGTTC
CTGTATAACATACAAGCATCACGAAGGGACTTGTGATATTGCAGGAAGGCCGAGCTGTTA
GGATCATTTTATTCAAATTACCTAATTAGAAACATAGTAAAATATTAATAGCAAACTCTG
TTGAAGTATGTTTAAAATATATTTATTTAGAATCAATCCTCGTGCCCATTATTTATGTAA
ATATTAAAAGTAGGAAATAATAACAGACTAAGACTTATGATTATTTTATAACTTAAATTC
TAATTTCATAACTATCCTAAATTTTGTTGACTTCCGGCCTGGCACAAAGAGGCGGGGCGT
GATGCACGCAAAATGGCGAACGACACACTGATTTAGCGAGGACGGAAGCAAGACGTACTT
TACAAAAGCGTATCGATTAAGACAATTAGTGTACTTTAAAACCTATTCAAAGTTGTGGAA
ATAAAGGAAGTGTAATCAAACAGCATTTGGATTGTTTTTTTTTGGTGAAAGCCAAAAGTT
CAAAAGCGGGATCCCCAC
(3078 bp)

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